BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30828 (658 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 154 9e-38 M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 154 9e-38 BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 154 9e-38 AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 154 9e-38 AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 154 9e-38 AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 154 9e-38 AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 154 9e-38 AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 154 9e-38 AY070554-1|AAL48025.1| 771|Drosophila melanogaster LD30968p pro... 30 3.2 AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA... 30 3.2 AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 29 5.6 AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 29 5.6 AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 29 5.6 AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 29 5.6 AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 29 5.6 AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 29 5.6 AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 29 5.6 >M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor protein. Length = 253 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 90 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 149 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 150 SAHSIGLMWWLLAREVLRLRGTISRS 175 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 178 WPVVVDLFFYRDPEEAEKEEAAAKE 202 >BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FBgn0003517;sta protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB, isoform B protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA, isoform A protein. Length = 270 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 107 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 166 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 167 SAHSIGLMWWLLAREVLRLRGTISRS 192 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 195 WPVVVDLFFYRDPEEAEKEEAAAKE 219 >AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD, isoform D protein. Length = 313 Score = 154 bits (374), Expect = 9e-38 Identities = 70/86 (81%), Positives = 76/86 (88%) Frame = +1 Query: 1 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTK 180 AFTNQIQ AFREPRLL+V DP DHQPI EASYVNIPVIA NTDSPLR++DIAIPCN K Sbjct: 150 AFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNK 209 Query: 181 SSHSIGLMWWLLAREVLRLRGVLPRT 258 S+HSIGLMWWLLAREVLRLRG + R+ Sbjct: 210 SAHSIGLMWWLLAREVLRLRGTISRS 235 Score = 45.2 bits (102), Expect = 8e-05 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = +3 Query: 264 WDVVVXLFFYRDPEESEKDEQQAKE 338 W VVV LFFYRDPEE+EK+E AKE Sbjct: 238 WPVVVDLFFYRDPEEAEKEEAAAKE 262 >AY070554-1|AAL48025.1| 771|Drosophila melanogaster LD30968p protein. Length = 771 Score = 29.9 bits (64), Expect = 3.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = +3 Query: 63 CTRPSTHY*SFICQH-SC-DCFVQHRLPTKICGHC 161 C +P T + C+H SC DC +QH + +K+C +C Sbjct: 708 CAKPITAVFT-PCKHQSCSDCIMQHMMNSKVCFYC 741 >AE014297-1946|AAF55136.1| 1332|Drosophila melanogaster CG6752-PA protein. Length = 1332 Score = 29.9 bits (64), Expect = 3.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = +3 Query: 63 CTRPSTHY*SFICQH-SC-DCFVQHRLPTKICGHC 161 C +P T + C+H SC DC +QH + +K+C +C Sbjct: 1269 CAKPITAVFT-PCKHQSCSDCIMQHMMNSKVCFYC 1302 >AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p protein. Length = 1022 Score = 29.1 bits (62), Expect = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 507 PGQTILLEQGVLQKQELQRVQQ 442 PGQTI+ ++ V Q Q LQ VQQ Sbjct: 697 PGQTIVTQRNVPQSQALQMVQQ 718 >AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome remodeling factor largesubunit NURF301 protein. Length = 2669 Score = 29.1 bits (62), Expect = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 507 PGQTILLEQGVLQKQELQRVQQ 442 PGQTI+ ++ V Q Q LQ VQQ Sbjct: 1834 PGQTIVTQRNVPQSQALQMVQQ 1855 >AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC, isoform C protein. Length = 2159 Score = 29.1 bits (62), Expect = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 507 PGQTILLEQGVLQKQELQRVQQ 442 PGQTI+ ++ V Q Q LQ VQQ Sbjct: 1834 PGQTIVTQRNVPQSQALQMVQQ 1855 >AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA, isoform A protein. Length = 2669 Score = 29.1 bits (62), Expect = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 507 PGQTILLEQGVLQKQELQRVQQ 442 PGQTI+ ++ V Q Q LQ VQQ Sbjct: 1834 PGQTIVTQRNVPQSQALQMVQQ 1855 >AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB, isoform B protein. Length = 2649 Score = 29.1 bits (62), Expect = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 507 PGQTILLEQGVLQKQELQRVQQ 442 PGQTI+ ++ V Q Q LQ VQQ Sbjct: 1814 PGQTIVTQRNVPQSQALQMVQQ 1835 >AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB, isoform B protein. Length = 2922 Score = 29.1 bits (62), Expect = 5.6 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 Query: 446 CTRCSSCFWSTPCSRRMVCP 505 C +CSS F++ P +R++CP Sbjct: 2627 CIQCSSGFFARPKQKRLICP 2646 >AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA, isoform A protein. Length = 2594 Score = 29.1 bits (62), Expect = 5.6 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 Query: 446 CTRCSSCFWSTPCSRRMVCP 505 C +CSS F++ P +R++CP Sbjct: 2299 CIQCSSGFFARPKQKRLICP 2318 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,139,018 Number of Sequences: 53049 Number of extensions: 576552 Number of successful extensions: 1832 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1831 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2806815600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -