Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30827
         (434 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    36   0.28 
UniRef50_Q2RZ26 Cluster: Cadherin domain protein; n=1; Salinibac...    33   2.0  
UniRef50_A5FSW4 Cluster: Helicase domain protein; n=2; Bacteria|...    33   2.6  
UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein P0665F...    33   3.5  
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    33   3.5  
UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Cion...    32   6.0  
UniRef50_Q17B84 Cluster: Serrate protein; n=2; Culicidae|Rep: Se...    31   8.0  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 36.3 bits (80), Expect = 0.28
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -2

Query: 400 DELTAHLMLSGYWSP 356
           DELTAHL+LSGYWSP
Sbjct: 161 DELTAHLVLSGYWSP 175


>UniRef50_Q2RZ26 Cluster: Cadherin domain protein; n=1; Salinibacter
           ruber DSM 13855|Rep: Cadherin domain protein -
           Salinibacter ruber (strain DSM 13855)
          Length = 1065

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
 Frame = -1

Query: 359 PIDIYNVDAPPTLRYKF*SLSIVTTATPPFKPKRILLHGRNKQGGGTYPRGLTSGPTTSN 180
           PI + + +APPT+     + SI    +P   P R+        G GT  R L SGP   +
Sbjct: 286 PIVVTSANAPPTVSLDPPNASIAENNSP---PTRVATVSVADDGLGTNERSL-SGPDAGS 341

Query: 179 YANYNFAGLIF-------ITRCYSFTVEVN 111
           +A  +  GL+         TR YS TV VN
Sbjct: 342 FALTDANGLVLTESADAEATRRYSVTVAVN 371


>UniRef50_A5FSW4 Cluster: Helicase domain protein; n=2;
           Bacteria|Rep: Helicase domain protein - Dehalococcoides
           sp. BAV1
          Length = 1122

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -3

Query: 354 RHLQR-GRATHLEIQVLKSQYSYNGYPTLQTETHSASRQ 241
           R +QR GR   +  +V K+ Y YN +PTLQ  T+  SR+
Sbjct: 823 RVIQRVGRINRISKRVFKNLYIYNFFPTLQGATYVKSRE 861


>UniRef50_Q7EYD8 Cluster: Putative uncharacterized protein
           P0665F09.120-1; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0665F09.120-1 - Oryza sativa subsp. japonica (Rice)
          Length = 496

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 18  GAFVLKRCTGVRIPQAGTNFSNEICTQQMFTIDFHGE 128
           G  ++ RCTGV I   G N   +I T      DFHGE
Sbjct: 199 GGGLISRCTGVVIGWDGANKRAKILTAASVVCDFHGE 235


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 32.7 bits (71), Expect = 3.5
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 144 NKNQTRKIIICVITGGRTTCESARIGTTALLISAVK 251
           +KN+ +K  + ++T G T C SA +GTT  ++   K
Sbjct: 317 SKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


>UniRef50_A4PIG5 Cluster: Ets transcription factor Elf; n=2; Ciona
           intestinalis|Rep: Ets transcription factor Elf - Ciona
           intestinalis (Transparent sea squirt)
          Length = 598

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = -1

Query: 254 LLHGRNKQGGGTYPRGLTSGPTTSNYANYNFAGLIFITRCYSFTVEVNREHLLSTYFIRK 75
           +L  RN+ G  TY R        S   +YN +G  ++  C     E N+ H+ ST+   K
Sbjct: 402 ILFARNQSGLITYDRAQLKNSRCSVSVSYNRSGYQYMVDCRR---ENNKVHISSTWVPEK 458

Query: 74  IGTRLRD 54
           +   L D
Sbjct: 459 VSQELLD 465


>UniRef50_Q17B84 Cluster: Serrate protein; n=2; Culicidae|Rep:
           Serrate protein - Aedes aegypti (Yellowfever mosquito)
          Length = 1335

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 20/67 (29%), Positives = 31/67 (46%)
 Frame = +3

Query: 6   DKTSGAFVLKRCTGVRIPQAGTNFSNEICTQQMFTIDFHGEGITSCNKNQTRKIIICVIT 185
           ++TSG+  L  C+G    ++ T  S+ +C Q  FT  F    +  C  N  +   IC+  
Sbjct: 669 NETSGSTALTPCSGRGKCESSTLGSSCVC-QTGFTGPFCQHNVNECFSNPCKNSGICIDG 727

Query: 186 GGRTTCE 206
               TCE
Sbjct: 728 DADYTCE 734


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,503,084
Number of Sequences: 1657284
Number of extensions: 9953825
Number of successful extensions: 21529
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21524
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)