Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30826
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p pro...   165   4e-41
AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA...   165   4e-41
AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha ...   165   4e-41
BT024211-1|ABC86273.1|  902|Drosophila melanogaster RE30796p pro...    30   3.2  
AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p pro...    30   3.2  
AE014134-1892|AAF52956.3|  880|Drosophila melanogaster CG6232-PA...    30   3.2  

>AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p
           protein.
          Length = 476

 Score =  165 bits (402), Expect = 4e-41
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   SGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDKVRALREAFYR 182
           SGISLFIATNICETIVWKAFSP TV TGRGTEFEGAVIALFHL+ATR DKVRALREAFYR
Sbjct: 177 SGISLFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYR 236

Query: 183 QNLPNLMNLLATVLVFAIVIYFQG 254
           QNLPNLMNLLATVLVFA+VIYFQG
Sbjct: 237 QNLPNLMNLLATVLVFAVVIYFQG 260



 Score =  139 bits (337), Expect = 3e-33
 Identities = 67/86 (77%), Positives = 69/86 (80%)
 Frame = +2

Query: 251 GLRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFSGNFLVN 430
           G RVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKF GNF +N
Sbjct: 260 GFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFIN 319

Query: 431 VLGVWADXXXXXXXXXXXXXXLCYYL 508
           +LGVWAD              LCYYL
Sbjct: 320 LLGVWADVGGGGPARSYPIGGLCYYL 345



 Score = 98.7 bits (235), Expect = 6e-21
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +1

Query: 508 APPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 660
           +PPES+ HI  DP+HALLY++FMLGSCAFFSKTWIDVSGSSAKDVAKQLKE
Sbjct: 346 SPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 396


>AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA
           protein.
          Length = 476

 Score =  165 bits (402), Expect = 4e-41
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   SGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDKVRALREAFYR 182
           SGISLFIATNICETIVWKAFSP TV TGRGTEFEGAVIALFHL+ATR DKVRALREAFYR
Sbjct: 177 SGISLFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYR 236

Query: 183 QNLPNLMNLLATVLVFAIVIYFQG 254
           QNLPNLMNLLATVLVFA+VIYFQG
Sbjct: 237 QNLPNLMNLLATVLVFAVVIYFQG 260



 Score =  139 bits (337), Expect = 3e-33
 Identities = 67/86 (77%), Positives = 69/86 (80%)
 Frame = +2

Query: 251 GLRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFSGNFLVN 430
           G RVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKF GNF +N
Sbjct: 260 GFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFIN 319

Query: 431 VLGVWADXXXXXXXXXXXXXXLCYYL 508
           +LGVWAD              LCYYL
Sbjct: 320 LLGVWADVGGGGPARSYPIGGLCYYL 345



 Score = 98.7 bits (235), Expect = 6e-21
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +1

Query: 508 APPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 660
           +PPES+ HI  DP+HALLY++FMLGSCAFFSKTWIDVSGSSAKDVAKQLKE
Sbjct: 346 SPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 396


>AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha
           protein.
          Length = 476

 Score =  165 bits (402), Expect = 4e-41
 Identities = 79/84 (94%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   SGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRPDKVRALREAFYR 182
           SGISLFIATNICETIVWKAFSP TV TGRGTEFEGAVIALFHL+ATR DKVRALREAFYR
Sbjct: 177 SGISLFIATNICETIVWKAFSPTTVTTGRGTEFEGAVIALFHLMATRNDKVRALREAFYR 236

Query: 183 QNLPNLMNLLATVLVFAIVIYFQG 254
           QNLPNLMNLLATVLVFA+VIYFQG
Sbjct: 237 QNLPNLMNLLATVLVFAVVIYFQG 260



 Score =  139 bits (337), Expect = 3e-33
 Identities = 67/86 (77%), Positives = 69/86 (80%)
 Frame = +2

Query: 251 GLRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFSGNFLVN 430
           G RVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKF GNF +N
Sbjct: 260 GFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQGNFFIN 319

Query: 431 VLGVWADXXXXXXXXXXXXXXLCYYL 508
           +LGVWAD              LCYYL
Sbjct: 320 LLGVWADVGGGGPARSYPIGGLCYYL 345



 Score = 98.7 bits (235), Expect = 6e-21
 Identities = 43/51 (84%), Positives = 48/51 (94%)
 Frame = +1

Query: 508 APPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 660
           +PPES+ HI  DP+HALLY++FMLGSCAFFSKTWIDVSGSSAKDVAKQLKE
Sbjct: 346 SPPESVGHILTDPIHALLYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKE 396


>BT024211-1|ABC86273.1|  902|Drosophila melanogaster RE30796p
           protein.
          Length = 902

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 134 QQMEQCYHSTLEFCAATSVNSGW*KCL-PYNGFT 36
           Q +E+C H  +E+CAA    S W +C  P  G T
Sbjct: 784 QSVEKCSHEEVEYCAARWHYSDWSECTKPCGGGT 817


>AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p
           protein.
          Length = 880

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 134 QQMEQCYHSTLEFCAATSVNSGW*KCL-PYNGFT 36
           Q +E+C H  +E+CAA    S W +C  P  G T
Sbjct: 762 QSVEKCSHEEVEYCAARWHYSDWSECTKPCGGGT 795


>AE014134-1892|AAF52956.3|  880|Drosophila melanogaster CG6232-PA
           protein.
          Length = 880

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 134 QQMEQCYHSTLEFCAATSVNSGW*KCL-PYNGFT 36
           Q +E+C H  +E+CAA    S W +C  P  G T
Sbjct: 762 QSVEKCSHEEVEYCAARWHYSDWSECTKPCGGGT 795


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,939,737
Number of Sequences: 53049
Number of extensions: 562564
Number of successful extensions: 1484
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)