Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30825
(409 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 115 3e-25
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 109 3e-23
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 108 4e-23
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 108 4e-23
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 102 3e-21
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 97 1e-19
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 95 4e-19
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 94 8e-19
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 91 1e-17
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 90 2e-17
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 89 3e-17
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 87 1e-16
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 85 4e-16
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 84 9e-16
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 84 1e-15
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 83 3e-15
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 81 1e-14
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 79 3e-14
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 79 4e-14
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 75 4e-13
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 72 4e-12
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 69 5e-11
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 67 1e-10
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 66 3e-10
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 64 8e-10
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 61 7e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 58 5e-08
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 58 9e-08
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 56 2e-07
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 47 1e-04
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 46 2e-04
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 3e-04
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 35 0.55
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_A5DI62 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_Q24FW2 Cluster: Von Willebrand factor type A domain con... 34 0.96
UniRef50_Q8NEM0 Cluster: Microcephalin; n=192; Eutheria|Rep: Mic... 33 2.2
UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q6PBF7 Cluster: Transmembrane protein 85; n=4; Deuteros... 31 6.8
UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n... 31 8.9
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 115 bits (277), Expect = 3e-25
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VK A+ KELAPYD +WFY R A+ RH+Y+R GV ++TKI+GGR+RNGV PSHF R
Sbjct: 35 DTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSR 94
Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
S S+AR+ LQ+LE LK+VEK QD
Sbjct: 95 GSKSVARRVLQALEGLKMVEKDQD 118
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 109 bits (261), Expect = 3e-23
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
DLVK KELAP D DW+YVR A++ R +YIRSP GV + +++G KR GVTP+HF +
Sbjct: 36 DLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAK 95
Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
+SGS+ RKALQ+LEA+K VEK D
Sbjct: 96 ASGSVIRKALQTLEAIKWVEKHPD 119
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 108 bits (260), Expect = 4e-23
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+
Sbjct: 58 DIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCK 117
Query: 182 SSGSIARKALQSLEALKLVE 241
SSG+I+R LQ L+ + +++
Sbjct: 118 SSGAISRNILQQLQKMGIID 137
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 108 bits (260), Expect = 4e-23
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+VKTARFKEL PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+
Sbjct: 38 DIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCK 97
Query: 182 SSGSIARKALQSLEALKLVE 241
SSG+I+R LQ L+ + +++
Sbjct: 98 SSGAISRNILQQLQKMGIID 117
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 102 bits (244), Expect = 3e-21
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+VKT KELAPYDPDW+YVR AAI RHIY+R VGV + K++GG G+ PSH
Sbjct: 35 DIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRD 94
Query: 182 SSGSIARKALQSLEALKLVEK 244
SGS+ RK +QSLE + ++EK
Sbjct: 95 GSGSVQRKVVQSLEKIGVLEK 115
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 97.1 bits (231), Expect = 1e-19
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+VK + +LAPY+PDWFYVR AAILRH+YIR P G+ + K F +KRNGV PSH
Sbjct: 35 DVVKLSSANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSL 93
Query: 182 SSGSIARKALQSLEALKLVEK 244
+ GS+ RKA+Q +EAL L +K
Sbjct: 94 AHGSVIRKAIQQMEALGLCQK 114
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 95.5 bits (227), Expect = 4e-19
Identities = 45/103 (43%), Positives = 64/103 (62%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+VKTA FKE +P DPDW+Y+R A+I R +Y+R GV ++ K++GG R GV HF +
Sbjct: 44 DVVKTASFKEYSPADPDWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQK 103
Query: 182 SSGSIARKALQSLEALKLVEKVQDVVAFSPHKVDETLTESLPR 310
+SG + R LQ LE +K+VEK + V K+ + L R
Sbjct: 104 ASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDR 146
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 94.3 bits (224), Expect = 8e-19
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D KT+ KELAP DPDWFY+R AA+LRH+Y GV + K++ +KRNG P+H CR
Sbjct: 57 DYAKTSVAKELAPQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCR 116
Query: 182 SSGSIARKALQSLEALKLVEK 244
+SG I R +Q LE++ +E+
Sbjct: 117 ASGKILRTIVQQLESIGFLEQ 137
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 90.6 bits (215), Expect = 1e-17
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VKT+ KELAP DP WFY+R AAILRH+Y G+ + +++ RKR G P+H C
Sbjct: 57 DYVKTSCAKELAPQDPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCP 116
Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
+SG I R +Q LEA +EK +D
Sbjct: 117 ASGKIIRTIVQQLEANGFLEKSKD 140
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 89.8 bits (213), Expect = 2e-17
Identities = 41/81 (50%), Positives = 53/81 (65%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D +KTA +ELAPYDPDW Y+R A+I R +YIR +G KI+G RKR G+ P +
Sbjct: 42 DTIKTAASRELAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSK 101
Query: 182 SSGSIARKALQSLEALKLVEK 244
SSG + R +LQ LE L + EK
Sbjct: 102 SSGGLIRYSLQQLEKLGVAEK 122
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 89.0 bits (211), Expect = 3e-17
Identities = 42/88 (47%), Positives = 55/88 (62%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT R KE P DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G P F + S
Sbjct: 35 VKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGS 94
Query: 188 GSIARKALQSLEALKLVEKVQDVVAFSP 271
G+I RK LQ LE LVEK ++ +P
Sbjct: 95 GAIIRKILQQLEEAGLVEKTEEGRVVTP 122
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/80 (51%), Positives = 51/80 (63%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT R KE P DW+Y R A+ILR +YI PVG++ + +GGRK G P F ++
Sbjct: 35 VKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAG 94
Query: 188 GSIARKALQSLEALKLVEKV 247
GSI RKALQ LEA +EKV
Sbjct: 95 GSIIRKALQQLEAAGFIEKV 114
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 85.4 bits (202), Expect = 4e-16
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D+ KTA ++EL P +PDW Y R A + R +YIR GV T ++FGG +RNGV P+HF
Sbjct: 37 DIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFAD 96
Query: 182 SSGSIARKALQSLEALKLVE 241
+G R L+ L+ LK++E
Sbjct: 97 VNGGNIRYCLKQLQNLKVIE 116
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 84.2 bits (199), Expect = 9e-16
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VKT+ EL P D DW+YVR AA+ RHIY+R VGV + K+ G K G P+H
Sbjct: 109 DTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVD 168
Query: 182 SSGSIARKALQSLEALKLVE 241
+SGS+ RK +QSLE + ++E
Sbjct: 169 ASGSVDRKIIQSLEKIGVLE 188
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 83.8 bits (198), Expect = 1e-15
Identities = 40/90 (44%), Positives = 57/90 (63%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
+ VKT KE P +PDW+YVR AA+LR +YI PVGV ++ +GG+K G P F R
Sbjct: 33 NFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRR 92
Query: 182 SSGSIARKALQSLEALKLVEKVQDVVAFSP 271
SG+I R+ALQ LE L+++ ++ +P
Sbjct: 93 GSGAIIRRALQQLEESGLIKREENGRVITP 122
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 82.6 bits (195), Expect = 3e-15
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +2
Query: 11 KTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSG 190
KT KE+ P DPDW++ R AA+LR +Y+ P+GV+ + +GG K G P+ F + SG
Sbjct: 36 KTGVHKEMPPEDPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSG 95
Query: 191 SIARKALQSLEALKLV 238
S+ RKALQ LEA L+
Sbjct: 96 SVLRKALQQLEAAGLI 111
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 80.6 bits (190), Expect = 1e-14
Identities = 38/88 (43%), Positives = 53/88 (60%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT KE +P DW+Y+R A+I R +YI PVG++ + +GGRKR G P F + S
Sbjct: 33 VKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGS 92
Query: 188 GSIARKALQSLEALKLVEKVQDVVAFSP 271
G+I R AL LE L V+K ++ +P
Sbjct: 93 GAIVRNALHQLEQLGFVKKTREGRVVTP 120
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 79.0 bits (186), Expect = 3e-14
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 KTARFKELAPYDPDWFYVR*AAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
KT KE P D DW+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++
Sbjct: 37 KTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAG 96
Query: 188 GSIARKALQSLEALKLVEKV 247
GS+ RK LQ LE LV KV
Sbjct: 97 GSVPRKILQQLEEAGLVVKV 116
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 78.6 bits (185), Expect = 4e-14
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VKTA KEL P + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H
Sbjct: 48 DHVKTASSKELPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAV 107
Query: 182 SSGSIARKALQSLEALKLVE 241
+S I R L L++L LVE
Sbjct: 108 ASRGIIRYCLIQLQSLGLVE 127
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 75.4 bits (177), Expect = 4e-13
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VKT KELAP +PDW Y+R AAI R +Y+ + +GV + + +G + PSH
Sbjct: 36 DTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTL 95
Query: 182 SSGSIARKALQSLEALKLVEKVQ 250
SG + R LQ LE + +V K+Q
Sbjct: 96 GSGKVNRYILQQLEKMGIVGKIQ 118
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 72.1 bits (169), Expect = 4e-12
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
+ VKT + ++LAP D DW++++ ++ILR +YI +GV + + F ++R GV P+H
Sbjct: 79 NFVKTGKGRKLAPLDEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSL 138
Query: 182 SSGSIARKALQSLEALKLVEK 244
+SG I R LQ LE + VE+
Sbjct: 139 ASGKILRSILQQLENIGYVEQ 159
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 68.5 bits (160), Expect = 5e-11
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
+++K++ +E AP +PDW+Y+R AA+LR IY+R VG ++K FG +K G P H
Sbjct: 60 EIMKSSHGRERAPQNPDWYYIRCAAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVT 119
Query: 182 SSGSIARKALQSLEALKLVE 241
SS A +SL L LVE
Sbjct: 120 SSTGPLHWACKSLTKLGLVE 139
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 66.9 bits (156), Expect = 1e-10
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT + P + DW++ R A+I+R IY+ P+G+ + K +GG K +G +H +
Sbjct: 34 VKTGAHADKPPQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAG 93
Query: 188 GSIARKALQSLEALKLVEKVQD----VVAFSPHKVDETLTESLPRFV 316
G+I R A+ LE L +EKV+ V K+D TE L +
Sbjct: 94 GAIIRNAIHGLEKLGYLEKVEKKGRIVSKQGMQKLDRLATEILKEMI 140
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 65.7 bits (153), Expect = 3e-10
Identities = 32/77 (41%), Positives = 45/77 (58%)
Frame = +2
Query: 14 TARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGS 193
T+ +ELAP D DW Y+R AA+ R +Y++ G+ T+ IFG K G + G
Sbjct: 43 TSVARELAPQDSDWVYIRTAALARKVYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGK 102
Query: 194 IARKALQSLEALKLVEK 244
I R AL+SLE LK++ K
Sbjct: 103 ILRWALKSLEDLKIIRK 119
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 64.5 bits (150), Expect = 8e-10
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = +2
Query: 5 LVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRS 184
+VKT KE +P D DW YVR AA+ R IY+R GV +T +FG NG S
Sbjct: 88 IVKTGLGKETSPIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHES----G 143
Query: 185 SGSIARKALQSLEALKLVEK 244
SG + R LQ LE +K+++K
Sbjct: 144 SGKVIRYLLQQLETIKVLKK 163
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 61.3 bits (142), Expect = 7e-09
Identities = 33/88 (37%), Positives = 45/88 (51%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT KE P DW YVR A++LR +YI +G+ ++ +GG+ G H S
Sbjct: 35 VKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGS 94
Query: 188 GSIARKALQSLEALKLVEKVQDVVAFSP 271
SI R LE+ LV+K Q + SP
Sbjct: 95 RSITRFLFHELESAGLVQKTQKGRSLSP 122
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 58.4 bits (135), Expect = 5e-08
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
DLVKTA K+LAP + +W+Y+R AA+ R IY+ + + +G + P H
Sbjct: 42 DLVKTASLKQLAPANNNWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHE 101
Query: 182 SSGSIARKALQSLEALKLV 238
+S + R LQ LE LV
Sbjct: 102 ASRKVIRTILQQLEKAGLV 120
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 57.6 bits (133), Expect = 9e-08
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +2
Query: 8 VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
VKT + P D W++ R A+++R IY+ P+G+ + +GG K G ++ ++
Sbjct: 28 VKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAG 87
Query: 188 GSIARKALQSLEALKLVEKV 247
G+I R A+ LE L +EK+
Sbjct: 88 GAIIRNAVHGLEKLGYIEKL 107
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 56.4 bits (130), Expect = 2e-07
Identities = 37/84 (44%), Positives = 44/84 (52%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
D VK A+ KELAPY+ +WFY R A+ RH V PSHF R
Sbjct: 180 DTVKLAKHKELAPYEENWFYTRAASTARH----------------------RVRPSHFSR 217
Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
S S A + LQ+LE LK+VEK QD
Sbjct: 218 GSKSAACRVLQALEGLKMVEKDQD 241
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/81 (27%), Positives = 46/81 (56%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
++ K++ K+ +P +W + R A+I+ YI +G + + +I+ G+K+ S
Sbjct: 34 EICKSSSLKKYSPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKKG--RRSKKTN 91
Query: 182 SSGSIARKALQSLEALKLVEK 244
SG I R +++ LE +K+++K
Sbjct: 92 GSGKIIRFSIKELEKMKILKK 112
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 46.4 bits (105), Expect = 2e-04
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPS 169
+ K+ KEL P D++YVR A++LR + P+G++ + +G +KR V P
Sbjct: 43 EFAKSGAGKELPPEQEDFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPG 102
Query: 170 HFCRSSGSIARKALQSLEALKLV 238
S + R +LQ+LE LV
Sbjct: 103 EHEGGSRKLIRASLQALEEDGLV 125
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 140 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 232
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 35.1 bits (77), Expect = 0.55
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = -1
Query: 253 VLNFLNKLQCLQRLQSLACNTA**PAEM*RCNSITFAPTKDLGDSLDSNR*ANVNMTKDG 74
+L + Q LQ L+ A +T AE+ ++++ DLG + + V + + G
Sbjct: 40 ILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHGANPSATPEVQVPRCG 99
Query: 73 SSTHIEPIRVIRSQLF 26
SS+ +EP+ ++ S+LF
Sbjct: 100 SSSRVEPVLIVGSKLF 115
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 34.7 bits (76), Expect = 0.73
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 129 RSLVGA-NVMELHLHISAGHQAVLHARLCNRWRH 227
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A5DI62 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 926
Score = 34.7 bits (76), Expect = 0.73
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +2
Query: 95 IRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDVVAFSP 271
I++ V + + + F VT F S G ARK L +E K K V P
Sbjct: 128 IKNAVNITNLEQKFYDEGIKSVTAKEFLASFGPSARKTLLKVETDKRDNSKTSTEVVPEP 187
Query: 272 HKVDETLTESLPRFV*RPSSRLSNKS 349
VDE +TE +P + S++ N +
Sbjct: 188 IIVDEDITEDIPEDIMEVESKIYNNA 213
>UniRef50_Q24FW2 Cluster: Von Willebrand factor type A domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Von Willebrand factor type A domain
containing protein - Tetrahymena thermophila SB210
Length = 1074
Score = 34.3 bits (75), Expect = 0.96
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = +2
Query: 107 VGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDVVAFSPHKVDE 286
V +T+ +F K N S +S I R Q L+ LKL+ K + SPHK +
Sbjct: 206 VVAQTMQYVFNSNKANQSMHSSVRQSQSPINRNNQQQLQNLKLLNKSTNSSLQSPHKKMQ 265
Query: 287 TLTESLPRFV*RPSSRLSNKS 349
T P + + ++RLSNKS
Sbjct: 266 ASTYD-P--IQQQANRLSNKS 283
>UniRef50_Q8NEM0 Cluster: Microcephalin; n=192; Eutheria|Rep:
Microcephalin - Homo sapiens (Human)
Length = 835
Score = 33.1 bits (72), Expect = 2.2
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 149 RNGVTPS-HFCRSSGSIARKALQSLEALKLVEKVQDVVAFSPHKVDETLTESLPRFV*RP 325
R + P CRS G + A +LEAL E D FSP + E +E+LP P
Sbjct: 378 RRSIMPRLQLCRSEGRLQHVAGPALEALSCGESSYDDY-FSPDNLKERYSENLPPESQLP 436
Query: 326 SS--RLSNKSL 352
SS +LS +SL
Sbjct: 437 SSPAQLSCRSL 447
>UniRef50_A6S452 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 654
Score = 31.9 bits (69), Expect = 5.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 189 PDDLQKCEGVTPLRLRPPKILVTVLTP 109
PDD+++ E + P LRP ++L T + P
Sbjct: 453 PDDIERTENIPPQPLRPKRVLKTTIIP 479
>UniRef50_Q6PBF7 Cluster: Transmembrane protein 85; n=4;
Deuterostomia|Rep: Transmembrane protein 85 - Xenopus
tropicalis (Western clawed frog) (Silurana tropicalis)
Length = 180
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 355 VQ*LVA*PAAWPL-DEPGQRFCQGLVYLV 272
+Q L+A PA + L + GQRF QGLVYL+
Sbjct: 107 IQALLATPATFKLLESSGQRFLQGLVYLI 135
>UniRef50_A6W3G9 Cluster: Peptidoglycan-binding LysM precursor; n=3;
Marinomonas sp. MWYL1|Rep: Peptidoglycan-binding LysM
precursor - Marinomonas sp. MWYL1
Length = 963
Score = 31.1 bits (67), Expect = 8.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 2 DLVKTARFKELAPYDPDWF-YVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPS 169
DL+ R++ + + D F + R AA+ RH +G+ TK G+ N +TP+
Sbjct: 591 DLIDKKRYQSITHFSFDVFGFSRGAALARHFVNALKMGLPDYTKHRSGKDTNRITPN 647
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,437,392
Number of Sequences: 1657284
Number of extensions: 6581266
Number of successful extensions: 17921
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 17438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17909
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -