Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30825
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   135   2e-32
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   135   2e-32
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   135   2e-32
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   135   2e-32
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   135   2e-32
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   135   2e-32
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   109   1e-24
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   109   1e-24
AE014296-2929|AAF49327.1|  412|Drosophila melanogaster CG6298-PA...    27   7.2  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  135 bits (327), Expect = 2e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D+VKTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  135 bits (327), Expect = 2e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D+VKTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  135 bits (327), Expect = 2e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D+VKTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  135 bits (327), Expect = 2e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D+VKTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  135 bits (327), Expect = 2e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D+VKTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  135 bits (326), Expect = 2e-32
 Identities = 60/84 (71%), Positives = 72/84 (85%)
 Frame = +2

Query: 2   DLVKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCR 181
           D++KTA+FKELAPYDPDWFYVR A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 35  DIIKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94

Query: 182 SSGSIARKALQSLEALKLVEKVQD 253
           ++   ARKALQ+LE  +LVEK  D
Sbjct: 95  AADGAARKALQALEHARLVEKHPD 118


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  109 bits (262), Expect = 1e-24
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = +2

Query: 8   VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
           +KT +FKE AP D DWFY R A+I+RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS
Sbjct: 37  MKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSS 96

Query: 188 GSIARKALQSLEALKLVEKVQD 253
               RKALQ+LEA  +VE+  D
Sbjct: 97  DGCIRKALQALEAANMVERHPD 118


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  109 bits (262), Expect = 1e-24
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = +2

Query: 8   VKTARFKELAPYDPDWFYVR*AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSS 187
           +KT +FKE AP D DWFY R A+I+RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS
Sbjct: 37  MKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSS 96

Query: 188 GSIARKALQSLEALKLVEKVQD 253
               RKALQ+LEA  +VE+  D
Sbjct: 97  DGCIRKALQALEAANMVERHPD 118


>AE014296-2929|AAF49327.1|  412|Drosophila melanogaster CG6298-PA
           protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 39  RMTLIGSMCVELPSFVIFTFAHLLESRLSPRSLVGANVMELHLH 170
           R  L  + CVE    + +    +L  RL+PR L+ +   E+HLH
Sbjct: 46  RYLLTAAHCVEKAVAITYYLGGVL--RLAPRQLIRSTNPEVHLH 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,350,874
Number of Sequences: 53049
Number of extensions: 328561
Number of successful extensions: 756
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)