Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30824
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.3  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 556 TITNSGYLLAINNLTDPDNIKD 621
           T+ N     A+NN  DP N+++
Sbjct: 148 TVKNFHPRCAVNNYNDPSNVRN 169


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 409 AFVLFSTVTHRKLKFYCNYFV 347
           A V+ S  T+R L+   N+F+
Sbjct: 55  ALVILSVFTYRPLRIVQNFFI 75


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 409 AFVLFSTVTHRKLKFYCNYFV 347
           A V+ S  T+R L+   N+F+
Sbjct: 55  ALVILSVFTYRPLRIVQNFFI 75


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 409 AFVLFSTVTHRKLKFYCNYFV 347
           A V+ S  T+R L+   N+F+
Sbjct: 55  ALVILSVFTYRPLRIVQNFFI 75


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 571 GYLLAINNLTD 603
           GYL+ +NNL D
Sbjct: 527 GYLIGVNNLID 537


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 571 GYLLAINNLTD 603
           GYL+ +NNL D
Sbjct: 442 GYLIGVNNLID 452


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 571 GYLLAINNLTD 603
           GYL+ +NNL D
Sbjct: 761 GYLIGVNNLID 771


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,582
Number of Sequences: 438
Number of extensions: 4020
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)