Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30823
(593 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 162 6e-39
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 151 2e-35
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 149 6e-35
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 147 1e-34
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 144 2e-33
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 133 3e-30
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 97 2e-19
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 92 8e-18
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 92 8e-18
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 90 3e-17
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 90 4e-17
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 86 5e-16
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 84 2e-15
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 82 8e-15
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 82 1e-14
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 66 4e-10
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 61 2e-08
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.008
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.058
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.72
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q4C1D2 Cluster: Leucine-rich repeat; n=2; Chroococcales... 33 5.0
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 33 5.0
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 162 bits (393), Expect = 6e-39
Identities = 74/86 (86%), Positives = 81/86 (94%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
KVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W
Sbjct: 32 KVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQN 91
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEAR 509
NLLPSRQFG++VLTTS GIMDHEEAR
Sbjct: 92 NLLPSRQFGFIVLTTSAGIMDHEEAR 117
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSK + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 151 bits (365), Expect = 2e-35
Identities = 69/100 (69%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Frame = +3
Query: 216 KAREKTSPHQALFKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPR 395
K ++ P + K IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPR
Sbjct: 117 KGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPR 176
Query: 396 FDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARE 512
FDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 177 FDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1
Query: 157 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
+ MV MNVL DALKS ++AEK GKRQ IR CSK+ + F
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRF 135
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 149 bits (360), Expect = 6e-35
Identities = 69/90 (76%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT- 431
KVI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT
Sbjct: 32 KVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTA 91
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEARENTL 521
LLPSRQFG++VLTTS GIMDHEEAR +
Sbjct: 92 RLLPSRQFGFIVLTTSAGIMDHEEARRKNV 121
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
MVR++VL+D LKS++NAEKRGKRQV+IRP SK + F
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKF 37
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 147 bits (357), Expect = 1e-34
Identities = 68/87 (78%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
KVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W
Sbjct: 198 KVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWRN 257
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEARE 512
NL PS QFG++VLTTS GIMDHEEAR+
Sbjct: 258 NLFPSCQFGFIVLTTSAGIMDHEEARQ 284
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 184 SDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
SDALKSI+NAEKRGKRQVLIR CSK + F
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRF 203
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 144 bits (348), Expect = 2e-33
Identities = 67/86 (77%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
KVIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W
Sbjct: 155 KVIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQN 214
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEAR 509
NLLP RQFG++VLTT GI+DHEEAR
Sbjct: 215 NLLPLRQFGFIVLTTLAGIIDHEEAR 240
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSK 258
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSK 155
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 133 bits (322), Expect = 3e-30
Identities = 63/86 (73%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
+VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W
Sbjct: 32 EVIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQN 90
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEAR 509
NLLPS QFG+++LTTS GI D EEAR
Sbjct: 91 NLLPSYQFGFIILTTSAGITDREEAR 116
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+ + F
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRF 37
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 97.5 bits (232), Expect = 2e-19
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
K+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF V +++ E+W
Sbjct: 32 KLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEK 91
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEARE 512
LP+ +FG L+++TS G+M H+EA E
Sbjct: 92 RFLPAFEFGILIVSTSQGVMSHKEAIE 118
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSK 258
M ++ L++AL I N+E+ GKR+V I+P SK
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASK 32
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 92.3 bits (219), Expect = 8e-18
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN 434
K+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R +
Sbjct: 32 KLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPD 91
Query: 435 ----LLPSRQFGYLVLTTSGGIMDHEE 503
LPS++ G ++++T G+M H +
Sbjct: 92 YIRKYLPSKEIGIIIISTPKGVMSHRD 118
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 92.3 bits (219), Expect = 8e-18
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
K I L VM GYIG+FE +DD +AG V L GR+NKCG I PR+ V ERW
Sbjct: 32 KNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEK 91
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEARENTL 521
LP++ FG L+LTTS G+M EAR+ +
Sbjct: 92 QFLPAKNFGALILTTSSGVMSQYEARDKKI 121
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 163 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKS 261
MV ++ L++AL +I NAE GK ++RP SK+
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKN 33
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 90.2 bits (214), Expect = 3e-17
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 434
V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R DV +IE++T
Sbjct: 32 VMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTER 91
Query: 435 LLPSRQFGYLVLTTSGGIMDHEEA 506
LP+RQ+GY+V+TT GI+DHEEA
Sbjct: 92 TLPTRQWGYVVITTPDGILDHEEA 115
Score = 35.1 bits (77), Expect = 1.3
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 178 VLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF 273
+L+DAL++I NAE+RGK V ++P S SF
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSF 36
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 89.8 bits (213), Expect = 4e-17
Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +3
Query: 270 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 446
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 447 RQFGYLVLTTSGGIMDHEE 503
RQFG+++ TS GI+DH+E
Sbjct: 95 RQFGHVLFNTSKGILDHKE 113
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 86.2 bits (204), Expect = 5e-16
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 434
+I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+W
Sbjct: 50 IIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKR 109
Query: 435 LLPSRQFGYLVLTTSGGIMDHEEARE 512
LP+R +G L++TTS G+M H EARE
Sbjct: 110 YLPARDYGTLIVTTSHGVMSHYEARE 135
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +3
Query: 225 EKTSPHQALFKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDV 404
EK + K+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF
Sbjct: 21 EKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSS 80
Query: 405 PINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARENTL 521
+ + E + LP+R FG L+++T+ G+M ++AR+ L
Sbjct: 81 SVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRL 120
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 82.2 bits (194), Expect = 8e-15
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 434
+I + L VM + YI FE++++ R GK V L+ +N CGVI PR V ++IER+ +
Sbjct: 32 MIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESR 91
Query: 435 LLPSRQFGYLVLTTSGGIMDHEEARE 512
LP++ FG ++LTT+ GIM H EAR+
Sbjct: 92 YLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-T 431
K+ V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V + W
Sbjct: 32 KLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQ 91
Query: 432 NLLPSRQFGYLVLTTSGGIMDHEEARE 512
LPS G LV+TT+ G+M H EA E
Sbjct: 92 QYLPSYDRGMLVVTTNQGVMSHHEAAE 118
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 66.5 bits (155), Expect = 4e-10
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Frame = +3
Query: 222 REKTSPHQALFKV---IVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISP 392
R K A F V I+K + +M + GYI + +VD R I + L+ N+ I P
Sbjct: 17 RRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKP 76
Query: 393 RFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARENTL 521
RF V +++E++ LP+ FG L+L+TS G++ + EA+E +
Sbjct: 77 RFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKI 120
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = +3
Query: 219 AREKTSPHQALFKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 386
AREK + Q + V FL + GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 87 AREKKT--QLAQTLTVYFLRAI---GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 40.7 bits (91), Expect = 0.025
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 157 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKSSLSF*Q 279
++ V + + +S++NAEKRGKRQVL+RP SK + F Q
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQ 71
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +3
Query: 270 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 425
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 318 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 419
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.058
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +3
Query: 300 IGEFEIVDDHRAGKIVVNLTGRLNK 374
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.72
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 327 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 479
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.5 bits (73), Expect = 3.8
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -2
Query: 238 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRIDF 119
G + SLA Y H SY W RFSS FV+N ID+
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVIDW 386
>UniRef50_Q4C1D2 Cluster: Leucine-rich repeat; n=2;
Chroococcales|Rep: Leucine-rich repeat - Crocosphaera
watsonii
Length = 715
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 87 HKG*IKDLY--NQKSIRFATKR-ELNLSHGAYERIE*RLKIYT*C*KAREKTSPHQALFK 257
HKG I+ N+K T R EL H +YER++ + C K + SPH +L+
Sbjct: 483 HKGEIRIRVSGNRKRDLLTTVRHELGKIHDSYERLKYETLVPCNCSKCKGSQSPHFSLWD 542
Query: 258 VIVKFL 275
V+ KF+
Sbjct: 543 VLNKFI 548
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 33.1 bits (72), Expect = 5.0
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 KVIVKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIERW 428
K+ + L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 28 KLCINVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKKL 87
Query: 429 TNLLPSRQFGYLVLTTSGGIMDHEEA 506
L + G+L+L+TS GI+ EE+
Sbjct: 88 EKFLTKKDSGFLILSTSKGILTDEES 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,200,137
Number of Sequences: 1657284
Number of extensions: 9117939
Number of successful extensions: 19739
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19721
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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