Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30821
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1021|AAF46246.3|  807|Drosophila melanogaster CG9650-PA...    31   1.6  
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    29   6.3  

>AE014298-1021|AAF46246.3|  807|Drosophila melanogaster CG9650-PA,
           isoform A protein.
          Length = 807

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -1

Query: 146 PSFRLLPKVRLRTVESLSLLIVKLFVIITCGLCCHCYLLSDC*FFIKH 3
           P   + PKVR    +S     V    I+TCG C   + LSD   FI+H
Sbjct: 3   PGNMISPKVRGTNSDSTENDAVATQDILTCGACQKAFALSDIVKFIQH 50


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
           protein.
          Length = 9196

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 353 TSISQTHYQIIQKMSCRNDK-CHLFFKVRYTISSDMSRLNEC*HNQSTIKPMA*NNFAFH 529
           T I+ T  + I K    ND    LF K R T+ +       C H   TI     N+F+  
Sbjct: 570 TEIANTEKREITKFPTTNDSHSDLFSKSRATLKTQSGEKTHCTHFTETISDKNYNSFSDT 629

Query: 530 KYYLDAL 550
            + L+++
Sbjct: 630 SFLLNSV 636


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,029,040
Number of Sequences: 53049
Number of extensions: 604995
Number of successful extensions: 1223
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)