Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30820
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical... 56 3e-08
AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical... 56 3e-08
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 56 3e-08
Z82084-7|CAB04979.2| 499|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 30 1.1
AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.1
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 29 2.6
>AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical
protein ZK185.2 protein.
Length = 503
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 FQPIVNGIGGNLVCVQSSRLATHLHQT-AIPGILPENTKIIEWPWKTLFFGTTAAKVARM 188
FQP++NG+GGNLV VQ+SR++T LH+ I + + PW+ F A A++
Sbjct: 335 FQPLINGLGGNLVAVQASRISTQLHRARKNREIEVRSLQTYINPWRAFFGNNEDASAAQI 394
Query: 189 LLILAVFGQIIFMVV 233
LL ++V IIF+ +
Sbjct: 395 LLGISVPSNIIFIFI 409
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 338 IVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFLGLAF 448
I++ MW + DPDN+AIP+LTALGDL+GS+ L L F
Sbjct: 444 ILVRAMWIMRIDPDNSAIPFLTALGDLIGSLLLILCF 480
>AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical
protein K07H8.2c protein.
Length = 429
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 FQPIVNGIGGNLVCVQSSRLATHLHQTAIPGILPENTKIIEWP--WKTLFFGTTAAKVAR 185
+ P++NG+GGNL VQ+SRL+T+ H+ G+LP + + + F ++ AR
Sbjct: 264 YGPVLNGVGGNLAAVQASRLSTYFHKAGTVGVLPNEWTVSRFTSVQRAFFSKEWDSRSAR 323
Query: 186 MLLILAVFGQIIF 224
+LL+L V G I F
Sbjct: 324 VLLLLVVPGHICF 336
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 275 FGITYLTCAXXXXXXXXXXAYIVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFLGLAFVI 454
F Y+ A +++ +WK K DPDN+ IPYLTALGDLLG+ L + F+
Sbjct: 358 FTSLYMIAAIIQVVILLFVCQLLVALLWKWKIDPDNSVIPYLTALGDLLGTGLLFIVFLT 417
Query: 455 LSLF 466
F
Sbjct: 418 TDHF 421
>AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical
protein K07H8.2b protein.
Length = 503
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 FQPIVNGIGGNLVCVQSSRLATHLHQTAIPGILPENTKIIEWP--WKTLFFGTTAAKVAR 185
+ P++NG+GGNL VQ+SRL+T+ H+ G+LP + + + F ++ AR
Sbjct: 338 YGPVLNGVGGNLAAVQASRLSTYFHKAGTVGVLPNEWTVSRFTSVQRAFFSKEWDSRSAR 397
Query: 186 MLLILAVFGQIIF 224
+LL+L V G I F
Sbjct: 398 VLLLLVVPGHICF 410
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 275 FGITYLTCAXXXXXXXXXXAYIVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFLGLAFVI 454
F Y+ A +++ +WK K DPDN+ IPYLTALGDLLG+ L + F+
Sbjct: 432 FTSLYMIAAIIQVVILLFVCQLLVALLWKWKIDPDNSVIPYLTALGDLLGTGLLFIVFLT 491
Query: 455 LSLF 466
F
Sbjct: 492 TDHF 495
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 FQPIVNGIGGNLVCVQSSRLATHLHQTAIPGILPENTKIIEWP--WKTLFFGTTAAKVAR 185
+ P++NG+GGNL VQ+SRL+T+ H+ G+LP + + + F ++ AR
Sbjct: 342 YGPVLNGVGGNLAAVQASRLSTYFHKAGTVGVLPNEWTVSRFTSVQRAFFSKEWDSRSAR 401
Query: 186 MLLILAVFGQIIF 224
+LL+L V G I F
Sbjct: 402 VLLLLVVPGHICF 414
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2
Query: 275 FGITYLTCAXXXXXXXXXXAYIVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFLGLAFVI 454
F Y+ A +++ +WK K DPDN+ IPYLTALGDLLG+ L + F+
Sbjct: 436 FTSLYMIAAIIQVVILLFVCQLLVALLWKWKIDPDNSVIPYLTALGDLLGTGLLFIVFLT 495
Query: 455 LSLF 466
F
Sbjct: 496 TDHF 499
>Z82084-7|CAB04979.2| 499|Caenorhabditis elegans Hypothetical
protein ZK1053.6 protein.
Length = 499
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +2
Query: 257 VTIQFAFGITYLTCAXXXXXXXXXXAYIVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFL 436
V F F I Y A +++ W DPDN AIP LT+ D+ G L
Sbjct: 428 VETDFRFFIAYALVVLIQQSTILYLAQLIVFAFWSFGIDPDNHAIPLLTSAADVCGCGLL 487
Query: 437 GLAFVIL 457
L F+ L
Sbjct: 488 YLLFLSL 494
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +3
Query: 3 YEVFQPIVNGIGGNLVCVQSSRLATHL--HQTAIPGILPENTKIIEWPWKTLFFGTTAAK 176
Y +Q +++G+ GN V +SR+++HL H+T+ G + I + ++ ++
Sbjct: 343 YPAYQTLISGLAGNRGAVLASRISSHLEVHKTSDLGWRQRASPISYYR-----SASSESR 397
Query: 177 VARMLLILAVFGQIIFM 227
AR+LL A+ Q+ F+
Sbjct: 398 TARLLLFTALPFQMFFV 414
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -1
Query: 257 PPLVHEVRDHHEDYLPEDGQDQQHASHLRRGRSKEQSLPRPLNDLSVLRQDPGDGGLVEV 78
P + R H + + Q +++G Q++P + ++ ++QDP ++
Sbjct: 835 PQMQQPGRQIHPNIKRQPQHQMQQNRSMQQGPHNPQNIPDQMMNMQQMQQDPMSQQPLQE 894
Query: 77 RGQPG-RLHAHQVPP 36
QP L HQ PP
Sbjct: 895 SPQPNLHLQHHQTPP 909
>AL023847-5|CAA19551.1| 247|Caenorhabditis elegans Hypothetical
protein Y57A10C.9 protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +2
Query: 269 FAFGITYLTCAXXXXXXXXXXAYIVIHFMWKRKKDPDNAAIPYLTALGDLLGSVFLGLAF 448
+ + +T L C AYI+ F K+ P+N + A+GDL +V A
Sbjct: 9 YVYLVTELCCLTAASLSFIFNAYIIYCFWRKKIPSPENLRLALYLAIGDLGYAV---AAL 65
Query: 449 VILSLFGLEYGNNVPVKTNKEYV 517
V + + Y +NV + N Y+
Sbjct: 66 VHVGYLAI-YWSNVSLDYNPYYI 87
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -3
Query: 483 LPYSSPKRDRMTKASPRNTEPRRSPS 406
+PY++P+++R + S R + P+R PS
Sbjct: 659 IPYNNPEKERAYQQSHRPSSPKRRPS 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,062,601
Number of Sequences: 27780
Number of extensions: 230025
Number of successful extensions: 811
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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