Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30817X
         (496 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   0.87 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   8.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.1  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   8.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.1  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 118 DLRVVLCRGGSDDGSHK 68
           DL+++L  GG ++GS+K
Sbjct: 92  DLKIILSMGGWNEGSYK 108


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 449 GGCSPHNPVLRLHYLNLS 396
           G C P NP++ + Y N++
Sbjct: 378 GLCGPKNPLINILYANMN 395


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
 Frame = +1

Query: 130  IRRQPRWSLQLQFRDFQRHRA----------YETGELKEALDDDNKPHVIVACVEATVTR 279
            IR+QP  SL +  RD  R+ A          Y    +   L  +  PH     + +T T 
Sbjct: 1353 IRQQPDGSLFI--RDVSRNNAGEYSCHVENDYGQDSVTHQLIVNAPPHAPQIALTSTTTN 1410

Query: 280  TLTANLKP 303
            +LT  LKP
Sbjct: 1411 SLTFKLKP 1418


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 480 IKLITSNKRMWW 445
           I+ +  NKR WW
Sbjct: 88  IRYLIKNKRDWW 99


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 1   IGYQQERTKTIKNE 42
           IGY  E++ TIK E
Sbjct: 324 IGYDNEQSVTIKTE 337


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 483 SIKLITSNKRMWWMFATQS 427
           S+K  T   ++WW F  ++
Sbjct: 49  SLKQYTCELKLWWEFCQRN 67


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 480 IKLITSNKRMWW 445
           I+ +  NKR WW
Sbjct: 88  IRYLIKNKRDWW 99


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  QQERTKTIKNEIDHRCSSR 66
           ++ER+ +  + I  RCSSR
Sbjct: 802 RRERSGSESSSISERCSSR 820


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,073
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)