Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30817X
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z82084-6|CAJ85781.1|  156|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z66520-11|CAA91383.1|  269|Caenorhabditis elegans Hypothetical p...    28   3.2  
AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical...    28   3.2  
AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical...    28   3.2  
AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical...    28   3.2  
Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical p...    27   5.7  
Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical p...    27   5.7  
AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical ...    27   5.7  
AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical ...    27   7.5  
AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical...    27   7.5  

>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 10   QQERTKTIKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRH 186
            Q ER K +KN++ +R SSR  G  H+ P + R LP D     R+  R + Q +F+  +  
Sbjct: 2525 QLER-KFLKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSK 2582

Query: 187  R 189
            R
Sbjct: 2583 R 2583


>Z82084-6|CAJ85781.1|  156|Caenorhabditis elegans Hypothetical
           protein ZK1053.7 protein.
          Length = 156

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 246 YCCVRGSYSYTNTDGKPETITYF 314
           Y  ++ +YSY N DG P + TY+
Sbjct: 109 YDIIKDTYSYDNVDGTPISCTYY 131


>Z66520-11|CAA91383.1|  269|Caenorhabditis elegans Hypothetical
           protein F49E12.9a protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 447 WMFATQSCIKASLLKSIQGI*KFSSWRRRPEE*IHPE 337
           W+  T S  +    KSI+G   + SW  +P + IHPE
Sbjct: 232 WIHGTDSTFR----KSIEGKRNYMSWSMKPIKQIHPE 264


>AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4c protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +1

Query: 187 RAYETGELKEALDDDNKPHVIVACVEATVTRTLTANLKPLRTSLTRLDTMLRVNLFLRSP 366
           R  ET    + LD D    VIV  +E+     L   LKP R      D+ +   L+  SP
Sbjct: 155 RLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKPRRMLQYFNDSRIHACLYFISP 214


>AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4b protein.
          Length = 461

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +1

Query: 187 RAYETGELKEALDDDNKPHVIVACVEATVTRTLTANLKPLRTSLTRLDTMLRVNLFLRSP 366
           R  ET    + LD D    VIV  +E+     L   LKP R      D+ +   L+  SP
Sbjct: 155 RLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKPRRMLQYFNDSRIHACLYFISP 214


>AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4a protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +1

Query: 187 RAYETGELKEALDDDNKPHVIVACVEATVTRTLTANLKPLRTSLTRLDTMLRVNLFLRSP 366
           R  ET    + LD D    VIV  +E+     L   LKP R      D+ +   L+  SP
Sbjct: 224 RLVETAGFGDQLDKDKSAKVIVDYLESQFETYLQEELKPRRMLQYFNDSRIHACLYFISP 283


>Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 289 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 402
           A L  LRT L+ L ++LR +LFL +      L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648


>Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 289 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 402
           A L  LRT L+ L ++LR +LFL +      L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648


>AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 289 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 402
           A L  LRT L+ L ++LR +LFL +      L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648


>AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +1

Query: 289 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 402
           A L  LRT L+ L ++LR +LFL +      L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648


>Z81473-8|CAB03899.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 RQQASRYCCVRGSYSYTNTDG 290
           R  A +Y  VRG YS+TN DG
Sbjct: 82  RYFAFKYEIVRGKYSHTNKDG 102


>Z81473-4|CAB03891.1|  463|Caenorhabditis elegans Hypothetical
           protein C17D12.3 protein.
          Length = 463

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 RQQASRYCCVRGSYSYTNTDG 290
           R  A +Y  VRG YS+TN DG
Sbjct: 82  RYFAFKYEIVRGKYSHTNKDG 102


>AL031636-1|CAA21046.2|  418|Caenorhabditis elegans Hypothetical
           protein Y47H9A.1 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +3

Query: 228 RQQASRYCCVRGSYSYTNTDG 290
           R  A +Y  VRG YS+TN DG
Sbjct: 82  RYFAFKYEIVRGKYSHTNKDG 102


>AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical
           protein Y110A7A.2 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 166 FRDFQRHRAYETGELKEALDDDNKPHVIVACVEATVTRT 282
           F++   H+  E  E+K  + DD   H+++ C      RT
Sbjct: 88  FKEHGCHKKGENSEVKRHVRDDRNLHLVLLCQSLNPIRT 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,794,294
Number of Sequences: 27780
Number of extensions: 204845
Number of successful extensions: 705
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)