Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30814
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.5  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 528 TVPWFSGNLAFKV*SQLHLLEIY 596
           TV W++GN+A KV   L ++  Y
Sbjct: 87  TVAWYAGNVACKVIRFLQVVVTY 109


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 93  SQETKGQNDSTNKAWSIK 40
           SQ T+G+ND+  +A  +K
Sbjct: 49  SQSTEGENDARPRASQVK 66


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 156 NFISNKVHQFIVRIYVLVFY 215
           NF + K+ QFIVR     F+
Sbjct: 73  NFATKKLEQFIVRFMKYHFF 92


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 185 YCKNLCFSILFSECTTTFY 241
           YC  + F++ F  CT  FY
Sbjct: 86  YCPFIIFTVHFLLCTYYFY 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,363
Number of Sequences: 336
Number of extensions: 4042
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)