Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30813X
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    25   0.14 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   0.56 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   5.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.9  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 25.4 bits (53), Expect = 0.14
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +1

Query: 73  FIVKLILVFTSVIVYRSNCKSEWR*RN*NKFSDHGNNGRALVREVYCIQKYV 228
           F++ +++ F  V   + N  ++W  R+ +      NN +  V  +  I K +
Sbjct: 5   FLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKII 56


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 0.56
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = -1

Query: 280 SVIILKIKTQLWLNINNERIFEYNKLRAQAPYRCYRGR*TYFSFVTATRFCNSN 119
           S+I+  +KT+ W  +NN+  +   KL+ +        +  YF  V +    +S+
Sbjct: 94  SIILGSLKTKEWAKLNNKFQYIDEKLKTRDQKERNLFKNAYFQLVLSISVYSSS 147


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 277 VIILKIKTQLWLNINNERIFEYNKLRAQAPYRC 179
           V++L     LW++    R+F+Y   R+   Y C
Sbjct: 125 VLLLLFDAYLWISSVGVRMFQYYIGRSFTYYVC 157


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 28  IMFI*HLFYTLALSSFIVKLILVFTSVIVY 117
           I+F  HL + L +  F+V L  +      Y
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLCIYYFY 150


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 247 WLNINNERIFEYN 209
           WL +NNE    YN
Sbjct: 425 WLYLNNEGSLVYN 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,471
Number of Sequences: 336
Number of extensions: 1059
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)