Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30811
(635 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 29 0.032
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 25 0.53
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 1.2
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 6.5
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 8.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.6
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 21 8.6
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 29.1 bits (62), Expect = 0.032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 388 YGSFQLFNKILLLM*RTGYCIYFHALLVCSLLHFCYYIFILL 513
Y +F LF LLL+ Y Y H L C+ + F ++ LL
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLL 283
Score = 25.0 bits (52), Expect = 0.53
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 388 YGSFQLFNKILLLM*RTGYCIYFHALLVCSLLHFCYYIFILLVR*LSV*T*IIHIIVDLY 567
Y F +F LL T Y Y +L+C +++ YY FI+ L I + +V L+
Sbjct: 86 YCPFIIFTVHFLLC--TYYFYYAFIILLC--VYYFYYAFIIFTVHLLFLLCIYYFVVPLF 141
Query: 568 LYQLLCFNLVH-K*IIFT 618
LLC + IIFT
Sbjct: 142 F--LLCIYYFYCAFIIFT 157
Score = 24.2 bits (50), Expect = 0.92
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 450 LFPCIISMFIVAFLLLHFYFTSSLAVCLDLNNSHYRRPLF 569
LF C +F V FLL +YF + + L + +Y +F
Sbjct: 84 LFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIF 123
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +1
Query: 436 TGYCIYFHALLVCSLLHFCYYIFILLVR*LSV*T*IIHIIVDLYLYQLLC 585
T + +++ L++ +++ YY FIL L + ++ I Y++ L C
Sbjct: 223 TIHLLFYCVLIILLCIYYFYYAFILFTVHLLL---LVCIYYFYYMHLLFC 269
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 25.0 bits (52), Expect = 0.53
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 11 ESPSTAISLKTR---ISPLSTLDLASSPWLMPV 100
ESP A L R I +ST+DL SS W +P+
Sbjct: 373 ESPPAADELLRRFHEIRYMSTIDLRSSYWQIPL 405
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 400 QLFNKILLLM*RTGYCIYFHALLVCSLLH 486
+L K +++M +G I+ + +CSL+H
Sbjct: 1151 KLVIKAIIIMILSGCIIFTEGIWICSLIH 1179
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 6.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 626 FFPVNIIYLCTK 591
FF VN++Y+C +
Sbjct: 278 FFIVNVLYICNQ 289
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 93 CRC*Y*WFPVLHHHCQDLLAGW 158
C+ WFP HC W
Sbjct: 128 CKMDITWFPFDDQHCDMKFGSW 149
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 93 CRC*Y*WFPVLHHHCQDLLAGW 158
C+ WFP HC W
Sbjct: 128 CKMDITWFPFDDQHCDMKFGSW 149
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 93 CRC*Y*WFPVLHHHCQDLLAGW 158
C+ WFP HC W
Sbjct: 128 CKMDITWFPFDDQHCDMKFGSW 149
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 93 CRC*Y*WFPVLHHHCQDLLAGW 158
C+ WFP HC W
Sbjct: 128 CKIDITWFPFDDQHCDMKFGSW 149
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = +3
Query: 93 CRC*Y*WFPVLHHHCQDLLAGW 158
C+ WFP HC W
Sbjct: 128 CKMDITWFPFDDQHCDMKFGSW 149
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 442 YCIYFHALLVCSLLHFCYYIFILLVR 519
Y IY + LL F +FILLV+
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVK 321
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 442 YCIYFHALLVCSLLHFCYYIFILLVR 519
Y IY + LL F +FILLV+
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVK 321
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 442 YCIYFHALLVCSLLHFCYYIFILLVR 519
Y IY + LL F +FILLV+
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVK 321
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 442 YCIYFHALLVCSLLHFCYYIFILLVR 519
Y IY + LL F +FILLV+
Sbjct: 296 YFIYMFVSVWKCLLFFVSVLFILLVK 321
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 21.0 bits (42), Expect = 8.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 489 LLLHFYFTSSLAVCLDLNNSHYRRPLFISTTMLQ 590
L FY+T L V + + YR + T LQ
Sbjct: 152 LYFQFYYTYFLCVIVCIFRGKYRNINLLLTEQLQ 185
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,716
Number of Sequences: 336
Number of extensions: 3194
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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