Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30811
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 134 4e-32
09_06_0359 + 22508900-22509439 133 1e-31
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 131 5e-31
02_01_0160 + 1116160-1116678 129 2e-30
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 114 5e-26
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 112 3e-25
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 111 3e-25
10_01_0309 + 3417602-3418147 106 2e-23
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 104 5e-23
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 98 6e-21
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 92 3e-19
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 92 4e-19
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 81 5e-16
06_01_0214 + 1634171-1634173,1634263-1634742 80 2e-15
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 74 1e-13
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 61 6e-10
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 58 8e-09
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 56 3e-08
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 52 3e-07
02_01_0086 + 613113-613532 45 4e-05
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 38 0.007
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.015
01_01_0077 - 585670-585787,585921-586687 35 0.062
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 34 0.082
08_02_0053 + 11721658-11721689,11721960-11722710 30 1.8
10_08_1028 + 22414928-22415154,22415374-22415558,22416001-22416056 29 3.1
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.1
10_01_0133 + 1621574-1625779 28 5.4
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 5.4
11_01_0535 + 4234282-4235082 27 9.4
03_06_0769 + 36134298-36134356,36134740-36134919,36134975-361350... 27 9.4
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 134 bits (325), Expect = 4e-32
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G GG+SIYG KF DENF +KHTGPG+LSMANAG DTNGSQFFITTV TSWLDG+HVVFG
Sbjct: 126 GRGGESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGK 185
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
V+ GM+VV +IE G QSG +++
Sbjct: 186 VLSGMDVVYKIEAEGQQSGSPKSKVV 211
>09_06_0359 + 22508900-22509439
Length = 179
Score = 133 bits (322), Expect = 1e-31
Identities = 59/86 (68%), Positives = 74/86 (86%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG++F DENF L+HTGPGVLSMANAG +TNGSQFFI T +T+WLDG+HVVFG
Sbjct: 81 GTGGESIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGK 140
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
VV+G VV+++E GS SG T++R+L
Sbjct: 141 VVDGYTVVEKMEQVGSGSGGTAERVL 166
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 131 bits (316), Expect = 5e-31
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGGKSIYG F+DENF L HTGPGV+SMANAG +TNGSQFFI TVKT WLDGRHVVFG
Sbjct: 154 GTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQ 213
Query: 181 VVEGMEVVKQIETFGSQSGKTSKR 252
V+EGM++VK IE+ + G K+
Sbjct: 214 VIEGMDIVKMIESQETDRGDRPKK 237
>02_01_0160 + 1116160-1116678
Length = 172
Score = 129 bits (311), Expect = 2e-30
Identities = 59/83 (71%), Positives = 66/83 (79%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KF DE F KH PG+LSMANAG +TNGSQFFI TV SWLDG+HVVFG
Sbjct: 79 GTGGESIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGR 138
Query: 181 VVEGMEVVKQIETFGSQSGKTSK 249
VVEGM+VVK IE GS+ G T+K
Sbjct: 139 VVEGMDVVKAIEKVGSRGGSTAK 161
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 114 bits (275), Expect = 5e-26
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTG SIYG F DENF + H+ PG+LSMAN DTNGSQFFITTVK + LDG+HVVFG
Sbjct: 115 GTGCDSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGK 174
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
V+ GM+VV +IE GSQSG ++L
Sbjct: 175 VLSGMDVVYKIEAEGSQSGTPRSKVL 200
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 112 bits (269), Expect = 3e-25
Identities = 51/72 (70%), Positives = 59/72 (81%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T LDG+HVVFG
Sbjct: 123 GTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGR 182
Query: 181 VVEGMEVVKQIE 216
V++GM VV+ +E
Sbjct: 183 VIKGMGVVRSME 194
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 111 bits (268), Expect = 3e-25
Identities = 50/72 (69%), Positives = 60/72 (83%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KFEDENF LKH G+LSMAN+G +TNGSQFFITT +T LDG+HVVFG
Sbjct: 141 GTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGR 200
Query: 181 VVEGMEVVKQIE 216
V++GM VV+ +E
Sbjct: 201 VIKGMGVVRSVE 212
>10_01_0309 + 3417602-3418147
Length = 181
Score = 106 bits (254), Expect = 2e-23
Identities = 52/86 (60%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 GTGGKSIY---GNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVV 171
GTGG+S F DE F +KH GPGV+SMANAG +TNGSQFFIT K WLDGRHV
Sbjct: 86 GTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVA 145
Query: 172 FGNVVEGMEVVKQIETFGSQSGKTSK 249
FG VV GM V+ I+ G+ SGKT K
Sbjct: 146 FGRVVAGMGAVRAIDRTGTWSGKTVK 171
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 104 bits (250), Expect = 5e-23
Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG
Sbjct: 555 GTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFG 614
Query: 178 NVVEGMEVVKQIE 216
VV+GM+VV+QIE
Sbjct: 615 RVVKGMDVVQQIE 627
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 97.9 bits (233), Expect = 6e-21
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG
Sbjct: 69 GRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFG 128
Query: 178 NVVEGMEVVKQI 213
V +GME+VK++
Sbjct: 129 RVSKGMEIVKRL 140
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTS 147
GTGG+SIYG F+DENFTLKHTGPGVLSMANAG DTNGSQFFI TVK S
Sbjct: 134 GTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVKFS 182
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/72 (59%), Positives = 54/72 (75%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G+GG+SIYG FEDENF L+H G+LSMANAG +TNGSQFFIT S LD + VFG
Sbjct: 83 GSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGK 142
Query: 181 VVEGMEVVKQIE 216
++ G +V+K+IE
Sbjct: 143 LILGNDVLKRIE 154
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 81.4 bits (192), Expect = 5e-16
Identities = 36/62 (58%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Frame = +1
Query: 76 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKR 252
V++MAN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE G+ +GK K+
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKK 176
Query: 253 ML 258
++
Sbjct: 177 VV 178
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K L+G + VF
Sbjct: 60 GKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFA 119
Query: 178 NVVEGMEVVKQIE 216
V+ G EV+ +E
Sbjct: 120 KVIHGFEVLDLME 132
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G+GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFFI L+ +H VFG
Sbjct: 404 GSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFG 463
Query: 178 NVVEGMEVVKQIE 216
VV G+ + +E
Sbjct: 464 MVVGGLTTLSAME 476
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTVKTSWLDGRHVVF 174
GTGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+ + WLD ++ +F
Sbjct: 72 GTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIF 131
Query: 175 GNV 183
G V
Sbjct: 132 GKV 134
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 57.6 bits (133), Expect = 8e-09
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Frame = +1
Query: 1 GTGGKSIY----GNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWL 153
G GG S+Y G++ F+DE L+H+ G ++MA+AG + N SQF+IT +L
Sbjct: 60 GAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYL 119
Query: 154 DGRHVVFGNVVEGMEVVKQI-ETFGSQSGKTSK 249
D +H VFG V EG + + +I ET+ G+ K
Sbjct: 120 DDKHTVFGMVAEGFDTLTKISETYVDDKGRPFK 152
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +1
Query: 34 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMEVVK 207
F+DE + L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 208 QI-ETFGSQSGKTSK 249
+I ET+ G+ K
Sbjct: 168 KINETYVDDKGRPFK 182
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 96
GTG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 110 GTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 118 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIE 216
QFFIT K WLD +HVVFG V+ +GM V++IE
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIE 233
>02_01_0086 + 613113-613532
Length = 139
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +1
Query: 40 DENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+ENF L H P + N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 63 NENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 136 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGK 240
V TS + +HVVFG VV GM ++K++E GS +GK
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGK 120
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 52 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLE 210
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 97 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 213
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 103 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+ G FITT L+ + VVFG V+ G ++V++IE
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = +1
Query: 49 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 192
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>10_08_1028 + 22414928-22415154,22415374-22415558,22416001-22416056
Length = 155
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 444 LHLFPCIISM-FIVAFLLLHFYFTSSLAVCLDLNNSHYRRP 563
+H+ P + + F+V FLL H +SSLA+ N RP
Sbjct: 44 IHIIPVLTLLCFLVLFLLSHDPASSSLAIATGRGNDGVHRP 84
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 209 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 84
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>10_01_0133 + 1621574-1625779
Length = 1401
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 284 LGNLTTVFDNILLEVFPDWLPKVSICLTTSMPSTTFPKTTCL 159
LGNL DN+L +WL +V+I + +S+P T K T L
Sbjct: 1068 LGNL----DNVLAFHDMEWLVRVTIKVCSSVPLATLQKLTSL 1105
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 111 ISISTGISHGEDARSSVLKGEILVF 37
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
>11_01_0535 + 4234282-4235082
Length = 266
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = -1
Query: 230 WLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNW-EPLVSAPALAMERTPGPV-CL 57
WLP + + TT+ ST + T LP++ +L V + PL L + R P P+ L
Sbjct: 64 WLPPLVLSATTTSLSTPTLRVTILPAALYMLHYVHRTLVHPL---RLLRLRRAPAPMPIL 120
Query: 56 RVKFS-SSNLL 27
+ F S NLL
Sbjct: 121 IIMFGFSFNLL 131
>03_06_0769 +
36134298-36134356,36134740-36134919,36134975-36135007,
36135008-36135128,36135227-36135266,36135811-36135863,
36135937-36135998,36136354-36136506,36136949-36137160,
36137480-36138972,36140560-36141483,36141734-36142043,
36143818-36143874,36144114-36144167,36144452-36144510
Length = 1269
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -3
Query: 192 AFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDA 73
A + P N S I G D+ + L T+SIS G ++GEDA
Sbjct: 263 ARSEFPPFNASGIMFMG-DNMKQNLETLSISNGDANGEDA 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,066,008
Number of Sequences: 37544
Number of extensions: 314230
Number of successful extensions: 692
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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