Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30811
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 144 4e-35
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 143 8e-35
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 142 1e-34
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 138 3e-33
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 136 9e-33
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 136 1e-32
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 136 2e-32
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 131 4e-31
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 131 4e-31
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 130 1e-30
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 113 1e-25
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 113 1e-25
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 111 4e-25
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 107 8e-24
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 101 3e-22
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 101 4e-22
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 101 4e-22
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 81 8e-16
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 76 2e-14
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 74 7e-14
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 66 2e-11
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 56 3e-08
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 55 5e-08
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.12
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 33 0.21
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 32 0.37
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 2.6
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 4.5
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 6.0
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 7.9
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 7.9
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 7.9
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 7.9
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 7.9
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 144 bits (349), Expect = 4e-35
Identities = 65/83 (78%), Positives = 73/83 (87%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG
Sbjct: 79 GTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQ 138
Query: 181 VVEGMEVVKQIETFGSQSGKTSK 249
VVEG++VVK IE GS SGK +K
Sbjct: 139 VVEGLDVVKAIEKVGSSSGKPTK 161
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 143 bits (347), Expect = 8e-35
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG
Sbjct: 80 GTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQ 139
Query: 181 VVEGMEVVKQIETFGSQSGKTSK 249
VVEG++VVK IE GS SGK +K
Sbjct: 140 VVEGLDVVKAIEKIGSSSGKPTK 162
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 142 bits (345), Expect = 1e-34
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T KTSWLDG+HVVFG
Sbjct: 80 GTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQ 139
Query: 181 VVEGMEVVKQIETFGSQSGKTSK 249
VVEG+ VV+ IE GS SG+TSK
Sbjct: 140 VVEGLNVVRDIEKVGSDSGRTSK 162
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 138 bits (334), Expect = 3e-33
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG
Sbjct: 107 GMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGK 166
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
VV+GM+VV +IE G QSG +++
Sbjct: 167 VVQGMDVVYKIEAEGKQSGTPKSKVV 192
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 136 bits (330), Expect = 9e-33
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG
Sbjct: 79 GTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGK 138
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
VV+G VVK +E GS G S+R++
Sbjct: 139 VVDGYNVVKAMEDVGSDMGNPSERVV 164
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 136 bits (329), Expect = 1e-32
Identities = 62/86 (72%), Positives = 70/86 (81%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG
Sbjct: 110 GMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGK 169
Query: 181 VVEGMEVVKQIETFGSQSGKTSKRML 258
VV GM+VV ++E G+QSG +++
Sbjct: 170 VVTGMDVVYKVEAEGNQSGTPKSKVV 195
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 136 bits (328), Expect = 2e-32
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG
Sbjct: 79 GTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQ 138
Query: 181 VVEGMEVVKQIETFGSQSGKTSK 249
VV+G++VVK IE GS SGKTSK
Sbjct: 139 VVKGLDVVKAIEKVGSDSGKTSK 161
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 131 bits (316), Expect = 4e-31
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG
Sbjct: 161 GTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQ 220
Query: 181 VVEGMEVVKQIETFGSQSGKTSKR 252
V+EGMEVVK IE + G ++
Sbjct: 221 VIEGMEVVKLIEEQETDRGDRPRK 244
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 131 bits (316), Expect = 4e-31
Identities = 59/79 (74%), Positives = 66/79 (83%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG
Sbjct: 134 GRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGK 193
Query: 181 VVEGMEVVKQIETFGSQSG 237
V+ GMEVV++IE G SG
Sbjct: 194 VLSGMEVVRKIEAQGQDSG 212
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 130 bits (313), Expect = 1e-30
Identities = 57/73 (78%), Positives = 66/73 (90%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG
Sbjct: 163 GTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQ 222
Query: 181 VVEGMEVVKQIET 219
V+EGM++V+ +E+
Sbjct: 223 VIEGMKLVRTLES 235
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 113 bits (271), Expect = 1e-25
Identities = 52/80 (65%), Positives = 60/80 (75%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG
Sbjct: 83 GTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGK 142
Query: 181 VVEGMEVVKQIETFGSQSGK 240
VVEGM V+K++E G+ GK
Sbjct: 143 VVEGMAVIKKMELVGTSDGK 162
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 113 bits (271), Expect = 1e-25
Identities = 52/80 (65%), Positives = 60/80 (75%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG
Sbjct: 83 GTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGK 142
Query: 181 VVEGMEVVKQIETFGSQSGK 240
VVEGM V+K++E G+ GK
Sbjct: 143 VVEGMAVIKKMELVGTSDGK 162
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 111 bits (267), Expect = 4e-25
Identities = 51/72 (70%), Positives = 60/72 (83%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG
Sbjct: 80 GTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGR 139
Query: 181 VVEGMEVVKQIE 216
V +GM VV+ IE
Sbjct: 140 VTKGMGVVRSIE 151
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 107 bits (256), Expect = 8e-24
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG
Sbjct: 105 GSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 164
Query: 181 VV-EGMEVVKQIE 216
V+ +G+ V+++IE
Sbjct: 165 VLGDGLLVMRKIE 177
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 101 bits (243), Expect = 3e-22
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG
Sbjct: 535 GTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFG 594
Query: 178 NVVEGMEVVKQIE 216
VV+GM+VV+ IE
Sbjct: 595 RVVKGMDVVQGIE 607
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 101 bits (242), Expect = 4e-22
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G
Sbjct: 122 GKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGK 181
Query: 181 VVEGMEVVKQIE-TFGSQSGKTSKRML 258
V++GM+ V IE G+ SGK K+++
Sbjct: 182 VIQGMDNVFAIEGGAGTYSGKPRKKVV 208
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 101 bits (242), Expect = 4e-22
Identities = 47/72 (65%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG
Sbjct: 69 GRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFG 128
Query: 178 NVVEGMEVVKQI 213
V GMEV+K++
Sbjct: 129 RVCRGMEVIKRL 140
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 80.6 bits (190), Expect = 8e-16
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG
Sbjct: 60 GKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFG 119
Query: 178 NVVEGMEVVKQIE 216
V+ G EV+ +E
Sbjct: 120 KVIHGFEVLDIME 132
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 180
GT G+SIY KF DE+ L+H G+LSM+ A D GS F IT LD +VVFG
Sbjct: 83 GTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGK 142
Query: 181 VVEGMEVVKQIETFGSQSGK 240
+++G E++K+IE G + GK
Sbjct: 143 LIQGKEILKKIERVGDEEGK 162
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 177
G GG+SI+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG
Sbjct: 403 GKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFG 462
Query: 178 NVVEGMEVVKQIE 216
VV G+ + +E
Sbjct: 463 GVVGGLATLAAME 475
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVF 174
GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H +F
Sbjct: 72 GTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIF 131
Query: 175 GNV 183
G V
Sbjct: 132 GKV 134
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 19 IYGNKFEDENFTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEG 192
I+ + +DE F L H GPG++SMA D+NGSQF I +DG HVV G VVEG
Sbjct: 81 IHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEG 136
Query: 193 MEVVKQIETFGSQSGKTSKRMLSKTVV 273
+++++ IE + T+ R SK VV
Sbjct: 137 LDLMRNIE---KEVITTTTRTPSKPVV 160
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Frame = +1
Query: 1 GTGGKSIY----GNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWL 153
G GG SIY G + ++DE + LKH+ G ++MA+ G + N SQF+ T +L
Sbjct: 60 GAGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYL 119
Query: 154 DGRHVVFGNVVEGMEVVKQI 213
DG+H VFG + EG + + +I
Sbjct: 120 DGKHTVFGQIAEGFDTLTRI 139
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 109 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 246
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 32.7 bits (71), Expect = 0.21
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 103 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 219
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 52 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = -1
Query: 275 LTTVFDNILLEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAP 96
+T VF IL F ++ T PS++ P TC ++E+ V+ P VS+P
Sbjct: 5 ITGVFILILTITFSS---SSAVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSP 56
Query: 95 ALAMERTPGPVCLRVKFSSS 36
M TP P+C V F+SS
Sbjct: 57 PNNMSETPDPICCSV-FTSS 75
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 118 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 118 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 118 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 216
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 418 LLLM*RTGYCIYFHALLVCSLLHFCYYI 501
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 37 EDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVK 207
E+E KH+ L + A +G DTNG FF KT+ +VF N + EVV+
Sbjct: 536 EEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTAKKDIELVFVNPLS--EVVE 593
Query: 208 QIETFGSQSGKTSKRMLSKTV 270
+++ Q L TV
Sbjct: 594 KLQRADEQKEFMRPEFLFLTV 614
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 183 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 55
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 131 VMKNWEPLVSAPALAMERTPGPVCLR 54
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 131 VMKNWEPLVSAPALAMERTPGPVCLR 54
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 176 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 9
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 131 VMKNWEPLVSAPALAMERTPGPVCLR 54
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,365
Number of Sequences: 28952
Number of extensions: 264728
Number of successful extensions: 605
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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