Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30810X
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127649-1|AAI27650.1| 140|Homo sapiens transmembrane protein 1... 30 3.9
BC070231-1|AAH70231.1| 139|Homo sapiens TMEM107 protein protein. 30 3.9
BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6, ... 30 3.9
AY358525-1|AAQ88889.1| 140|Homo sapiens GRVS638 protein. 30 3.9
AK092627-1|BAC03928.1| 235|Homo sapiens protein ( Homo sapiens ... 30 3.9
AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein. 30 3.9
AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein. 30 3.9
BC022050-1|AAH22050.1| 551|Homo sapiens DMXL2 protein protein. 29 6.9
AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein. 29 6.9
AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein. 29 6.9
>BC127649-1|AAI27650.1| 140|Homo sapiens transmembrane protein 107
protein.
Length = 140
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 204 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 106
S LGL+ VE A FLSG ++ + + ++IG H
Sbjct: 58 SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90
>BC070231-1|AAH70231.1| 139|Homo sapiens TMEM107 protein protein.
Length = 139
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 204 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 106
S LGL+ VE A FLSG ++ + + ++IG H
Sbjct: 64 SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 96
>BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6,
member B (zinc finger protein) protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 139 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKH*LSLSQRDPTASNP 294
+S +S EEG + PQS + T Q+ AP L SQ T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289
>AY358525-1|AAQ88889.1| 140|Homo sapiens GRVS638 protein.
Length = 140
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 204 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 106
S LGL+ VE A FLSG ++ + + ++IG H
Sbjct: 58 SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90
>AK092627-1|BAC03928.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ35308 fis, clone PROST2009909, weakly similar to
ADAM 12 PRECURSOR (EC 3.4.24.-). ).
Length = 235
Score = 30.3 bits (65), Expect = 3.9
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 28 CVLVALCSGAPQQNPQDVQILRFDSNVEPDGYSF--AYETSDGTSRQEEGKLDNPQS--E 195
C L C+G P DV +L GY + A T + +Q G + ++
Sbjct: 35 CDLPEFCTGTSSHCPPDVYLLDGSPCARGSGYCWDGACPTLEQQCQQLWGPGERTRAPLH 94
Query: 196 NAALTVTGQYAYVAPDGKH*LSLSQRDPTASNPKP 300
A + G Y DG+ L ++R P+ S P+P
Sbjct: 95 PAPHPLVGPVFYCGEDGQGKLRPAERSPSPSCPQP 129
>AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 139 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKH*LSLSQRDPTASNP 294
+S +S EEG + PQS + T Q+ AP L SQ T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289
>AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 139 TSDGTSRQEEGKLDNPQSENAALTVTGQYAYVAPDGKH*LSLSQRDPTASNP 294
+S +S EEG + PQS + T Q+ AP L SQ T+ +P
Sbjct: 238 SSSSSSSSEEGPIPGPQSRLSPTAATVQFKCGAPASTPYLLTSQAQDTSGSP 289
>BC022050-1|AAH22050.1| 551|Homo sapiens DMXL2 protein protein.
Length = 551
Score = 29.5 bits (63), Expect = 6.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 241 DGKH*LSLSQRDPTASNPKPHWARS*NPKNLWTYR-ILRLNIS*TMIL*AAKRSRCYHLT 417
DG+ LS+ Q + TASNPKP+ + + K + I ++ T R+ C T
Sbjct: 340 DGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDT 399
Query: 418 L*CPVTKAISNFSCH 462
L P I F+CH
Sbjct: 400 LISPGNSLIHGFTCH 414
>AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein.
Length = 3036
Score = 29.5 bits (63), Expect = 6.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 241 DGKH*LSLSQRDPTASNPKPHWARS*NPKNLWTYR-ILRLNIS*TMIL*AAKRSRCYHLT 417
DG+ LS+ Q + TASNPKP+ + + K + I ++ T R+ C T
Sbjct: 2825 DGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDT 2884
Query: 418 L*CPVTKAISNFSCH 462
L P I F+CH
Sbjct: 2885 LISPGNSLIHGFTCH 2899
>AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein.
Length = 2237
Score = 29.5 bits (63), Expect = 6.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 241 DGKH*LSLSQRDPTASNPKPHWARS*NPKNLWTYR-ILRLNIS*TMIL*AAKRSRCYHLT 417
DG+ LS+ Q + TASNPKP+ + + K + I ++ T R+ C T
Sbjct: 2026 DGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDT 2085
Query: 418 L*CPVTKAISNFSCH 462
L P I F+CH
Sbjct: 2086 LISPGNSLIHGFTCH 2100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,398,961
Number of Sequences: 237096
Number of extensions: 1605322
Number of successful extensions: 4528
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4527
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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