Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30809X
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 116 5e-25
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 113 3e-24
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 91 2e-17
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 63 5e-09
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 57 2e-07
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 57 2e-07
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 52 9e-06
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 50 3e-05
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 45 0.001
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 36 0.84
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 36 0.84
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 35 1.5
UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; ... 35 1.5
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 34 1.9
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 33 5.9
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 33 5.9
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 32 7.8
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 116 bits (278), Expect = 5e-25
Identities = 55/71 (77%), Positives = 58/71 (81%)
Frame = +2
Query: 53 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 233 KVKADRDERHP 265
KVKADRDE P
Sbjct: 61 KVKADRDESSP 71
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = +1
Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
QDVA++C+ LGITALHIKLRA AQ MKIGRIEDVTP+ SD
Sbjct: 79 QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138
Query: 466 STRRR 480
STRR+
Sbjct: 139 STRRK 143
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 113 bits (271), Expect = 3e-24
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = +2
Query: 53 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 233 KVKADRDE 256
KVKADRDE
Sbjct: 61 KVKADRDE 68
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +2
Query: 80 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDER 259
K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71
Query: 260 HP 265
P
Sbjct: 72 SP 73
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 62.9 bits (146), Expect = 5e-09
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = +1
Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
QDVA +C+ LGITALHIK+RA Q +KIGRIEDVTP +D
Sbjct: 126 QDVAARCKELGITALHIKMRAKGGNKTKSPGPGGQSALRALSRSGIKIGRIEDVTPTPTD 185
Query: 466 STRRR 480
STRR+
Sbjct: 186 STRRK 190
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +2
Query: 179 HVTDLSGRETIARVTGGMKVKADRDERHP 265
HVTDLSG+ET++R TGGMKVKADRDE P
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSP 118
Score = 48.8 bits (111), Expect = 8e-05
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +2
Query: 62 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 178
R V+ V T +GPQ GE VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 57.2 bits (132), Expect = 2e-07
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 134 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP 265
+G+ HI++S+N+T +H TD++G ETIARV+GG + RDE P
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSP 52
Score = 40.7 bits (91), Expect = 0.022
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 292 VAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASDST 471
+AE + GI +HIK+RA AQ ++IGRIEDVTPV D T
Sbjct: 62 LAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 57.2 bits (132), Expect = 2e-07
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 107 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP 265
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E P
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSP 118
Score = 42.3 bits (95), Expect = 0.007
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 292 VAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASDST 471
V E G T HI++RA AQ +IGRI+DVTP+ D+T
Sbjct: 128 VIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
Query: 472 RRR 480
R++
Sbjct: 188 RKK 190
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 52.0 bits (119), Expect = 9e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 134 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP 265
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD E P
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSP 89
Score = 41.5 bits (93), Expect = 0.013
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +1
Query: 292 VAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASDST 471
VA + + GIT ++I++RA AQ +++ RIEDVTP+ +D+T
Sbjct: 99 VAAEAKEKGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPIPTDTT 158
Query: 472 RR 477
RR
Sbjct: 159 RR 160
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 50.4 bits (115), Expect = 3e-05
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +1
Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
Q V+ C+ LGI ALHIK+RA A KIGRIED TP ++
Sbjct: 63 QKVSNVCKVLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPTPTN 122
Query: 466 STRRRVAE 489
TRR+ E
Sbjct: 123 GTRRKEFE 130
Score = 49.6 bits (113), Expect = 5e-05
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +2
Query: 131 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDER 259
+FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D++
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKK 53
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVK 241
++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK +
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ 54
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 35.5 bits (78), Expect = 0.84
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 286 QDVAEKCETLGITALHIKLRA 348
QDV ++C+ LGITALHIKL A
Sbjct: 20 QDVVQRCKELGITALHIKLLA 40
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 35.5 bits (78), Expect = 0.84
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 250
G+AH+ ASFN+T + +TD G +GG K R
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR 61
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 34.7 bits (76), Expect = 1.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 250
G+AHI ASFN+T V +TD G +GG + R
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR 57
>UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2;
n=2; Saccharomyces cerevisiae|Rep: Good for full DBP5
activity protein 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 566
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 113 HLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHPTLL 274
H G + H+F F D V+ +SG + + +V G +KV +RD R P ++
Sbjct: 461 HNAGNDAYYTLHLFMKFCD--VNFRKISGMDDVLKVMGQVKVWGERDVREPKVV 512
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 250
G+AHI A+FN+T V +TD+ G G + K R
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR 54
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 32.7 bits (71), Expect = 5.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 250
G+AHI ASFN+T V ++D SG + +G + + R
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR 69
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGR 202
GV H+ ASFN+T V VTD+ GR
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGR 49
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 32.3 bits (70), Expect = 7.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 137 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADR 250
GVAHI ++FN+T V +TD +G G + K R
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,213,444
Number of Sequences: 1657284
Number of extensions: 10348896
Number of successful extensions: 22777
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22768
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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