Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30809X
         (555 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   116   7e-26
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   116   7e-26
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   116   7e-26
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   116   7e-26
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   116   7e-26
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   116   7e-26
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   111   2e-24

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  116 bits (278), Expect = 7e-26
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 70.5 bits (165), Expect = 4e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  111 bits (267), Expect = 2e-24
 Identities = 53/71 (74%), Positives = 56/71 (78%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAP K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1   MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDESSP 71



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 35/75 (46%), Positives = 42/75 (56%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVA++C+ LGI ALHI+LRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALACSGMKIGRIEDVTPIPSD 138

Query: 466 STRRRVAEEDAGCNR 510
           ST R+     A C +
Sbjct: 139 STLRKGVTVVAVCEQ 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,566,109
Number of Sequences: 237096
Number of extensions: 1828257
Number of successful extensions: 3845
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3839
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)