Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30809X
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...   132   3e-31
M21045-2|AAA28853.1|  151|Drosophila melanogaster protein ( D.me...   124   8e-29
M21045-1|AAA28852.1|  151|Drosophila melanogaster protein ( D.me...   124   8e-29
AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p pro...   124   8e-29
AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA...   124   8e-29
AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB...   124   8e-29
AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA...   124   8e-29
AE014298-3028|AAN09549.1| 1148|Drosophila melanogaster CG1695-PB...    29   4.2  
AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA...    29   4.2  
X62629-1|CAA44496.1|  974|Drosophila melanogaster lodestar prote...    28   7.4  
BT015973-1|AAV36858.1|  835|Drosophila melanogaster RE74565p pro...    28   7.4  
AY118417-1|AAM48446.1|  835|Drosophila melanogaster RE70645p pro...    28   7.4  
AE014297-673|AAF54167.1| 1061|Drosophila melanogaster CG2684-PA ...    28   7.4  

>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score =  132 bits (319), Expect = 3e-31
 Identities = 73/107 (68%), Positives = 76/107 (71%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHPTLLCWRHRM*QRNAKLLA*RPCT*SSVLLVETIQRP 373
           KVKADRDE  P       RM  R+A+  A  PC  S V    T  RP
Sbjct: 61  KVKADRDEASPYAAMSPLRMWLRSARHWALLPCILSCVPPAATRPRP 107


>M21045-2|AAA28853.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>M21045-1|AAA28852.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p
           protein.
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA
           protein.
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB,
           isoform B protein.
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA,
           isoform A protein.
          Length = 151

 Score =  124 bits (299), Expect = 8e-29
 Identities = 61/71 (85%), Positives = 62/71 (87%)
 Frame = +2

Query: 53  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 232
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 233 KVKADRDERHP 265
           KVKADRDE  P
Sbjct: 61  KVKADRDEASP 71



 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 39/65 (60%), Positives = 42/65 (64%)
 Frame = +1

Query: 286 QDVAEKCETLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVASD 465
           QDVAEKC+TLGITALHIKLRA            AQ          MKIGRIEDVTP+ SD
Sbjct: 79  QDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSD 138

Query: 466 STRRR 480
           STRR+
Sbjct: 139 STRRK 143


>AE014298-3028|AAN09549.1| 1148|Drosophila melanogaster CG1695-PB,
           isoform B protein.
          Length = 1148

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -3

Query: 334 CARPLCQEFRISLLHPVPPT*QRRVTLITVSLHLHATSDTGDSFPA 197
           CA  L Q  RIS  +  PPT  R +     SLH  +   +  SF A
Sbjct: 201 CADELVQRHRISSGNRTPPTTHRPIINFKRSLHTSSEDTSSGSFKA 246


>AE014298-3027|AAF50900.3| 1073|Drosophila melanogaster CG1695-PA,
           isoform A protein.
          Length = 1073

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -3

Query: 334 CARPLCQEFRISLLHPVPPT*QRRVTLITVSLHLHATSDTGDSFPA 197
           CA  L Q  RIS  +  PPT  R +     SLH  +   +  SF A
Sbjct: 201 CADELVQRHRISSGNRTPPTTHRPIINFKRSLHTSSEDTSSGSFKA 246


>X62629-1|CAA44496.1|  974|Drosophila melanogaster lodestar protein
           protein.
          Length = 974

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 158 SFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP-TLLCWRHR 289
           S  D  V + DL G E +A    G+KV     ++H    + WR R
Sbjct: 411 SLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRER 455


>BT015973-1|AAV36858.1|  835|Drosophila melanogaster RE74565p
           protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 158 SFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP-TLLCWRHR 289
           S  D  V + DL G E +A    G+KV     ++H    + WR R
Sbjct: 185 SLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRER 229


>AY118417-1|AAM48446.1|  835|Drosophila melanogaster RE70645p
           protein.
          Length = 835

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 158 SFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP-TLLCWRHR 289
           S  D  V + DL G E +A    G+KV     ++H    + WR R
Sbjct: 185 SLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRER 229


>AE014297-673|AAF54167.1| 1061|Drosophila melanogaster CG2684-PA
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 158 SFNDTFVHVTDLSGRETIARVTGGMKVKADRDERHP-TLLCWRHR 289
           S  D  V + DL G E +A    G+KV     ++H    + WR R
Sbjct: 411 SLKDLHVSLEDLPGPEVLAEDPVGLKVSLMNHQKHALAWMSWRER 455


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,380,388
Number of Sequences: 53049
Number of extensions: 514240
Number of successful extensions: 1160
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)