Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30800X
(410 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43031| Best HMM Match : OEP (HMM E-Value=0.27) 29 2.0
SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 28 2.6
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22) 28 2.6
SB_21184| Best HMM Match : Phage_DNA_bind (HMM E-Value=8.2) 28 3.4
SB_18834| Best HMM Match : FlgM (HMM E-Value=4.7) 28 3.4
SB_59305| Best HMM Match : UBA (HMM E-Value=5.9) 27 4.5
SB_46512| Best HMM Match : TIL (HMM E-Value=1.3) 27 4.5
SB_45886| Best HMM Match : OEP (HMM E-Value=2) 27 4.5
SB_45094| Best HMM Match : DUF1090 (HMM E-Value=1.6) 27 4.5
SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16) 27 4.5
SB_39148| Best HMM Match : OEP (HMM E-Value=0.33) 27 4.5
SB_18987| Best HMM Match : OEP (HMM E-Value=0.61) 27 6.0
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_41618| Best HMM Match : OEP (HMM E-Value=0.56) 27 6.0
SB_5425| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 27 7.9
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 27 7.9
>SB_43031| Best HMM Match : OEP (HMM E-Value=0.27)
Length = 445
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
L K K + Y L N + + +K H KAKYK K
Sbjct: 138 LAKAKYKLAKAKYKLANAKYKLANAKYKHAKAKYKLAKAK 177
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 64 KKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
K K + Y L + +K+K H KAKYK K
Sbjct: 210 KAKYKLAKAKYKLAKAKYKLAKAKYKHAKAKYKLANAK 247
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KAKYK K + KL
Sbjct: 145 LAKAKYKLANAKYKLANAKYKHAKAKYKLAKAKYKLANAKYKHAKAKYKL 194
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKLT 210
L K K + Y L N + +K+ KAKYK K + KLT
Sbjct: 33 LAKAKYKLAKAKYKLANAKYKLAKATYTLAKAKYKLAKAKYKLAKAKYKLT 83
>SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28)
Length = 561
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 278 LPTFEGYCLVPPFFSP 231
+PT +GY LVP FFSP
Sbjct: 528 MPTAQGYGLVPNFFSP 543
>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
Length = 1043
Score = 28.3 bits (60), Expect = 2.6
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 4 GSNTA*SG-GQACCSTCRWLTKKKSTIKPRNYDLGNGVMRFSKS-KMFHKKAKYKFIGKK 177
GSN G C T + L ++ T K YDL + +++ K K K+KFIG +
Sbjct: 21 GSNEPGRGVSPEICETRKELRQRPRTEKGLEYDLEIATKKRNRALKDRAAKLKHKFIGLQ 80
Query: 178 NPKPEKSNKLTVVVKQIRGEKNG 246
+ K + T+ +Q E+ G
Sbjct: 81 KQQDIKRQRETLEREQRELERKG 103
>SB_21184| Best HMM Match : Phage_DNA_bind (HMM E-Value=8.2)
Length = 270
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = +1
Query: 85 PRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKLTVVVKQIRGEKNGGTRQYP 264
PR Y L N + + ++ K + + ++ KP ++ K V+ + +R R+Y
Sbjct: 97 PRYYTL-NQICKITRET--DVKIDFSALLHEDSKPAENEKYRVLQELLRHNHFSQAREYA 153
Query: 265 SNVGSPSTPLRRKSVLHQVAVIQQSCAQD 351
+ P+ + VLH+ I+ S D
Sbjct: 154 KLLDLPADDVTLNEVLHEKKSIENSVLWD 182
>SB_18834| Best HMM Match : FlgM (HMM E-Value=4.7)
Length = 233
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K + Y L N + +K+K KAKYKF K + KL
Sbjct: 83 LANAKYKLAKAKYKLANAKYKLAKAKYKVAKAKYKFANAKYKLAKAKYKL 132
>SB_59305| Best HMM Match : UBA (HMM E-Value=5.9)
Length = 129
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KAKYK K + KL
Sbjct: 68 LAKAKYKLAKAKYKLANAKYKLAKAKYKLAKAKYKLANAKYKLAKAKYKL 117
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
L K K + Y L N + +K+K KAKYK K
Sbjct: 89 LAKAKYKLAKAKYKLANAKYKLAKAKYKLAKAKYKLANAK 128
>SB_46512| Best HMM Match : TIL (HMM E-Value=1.3)
Length = 382
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKS 198
L K K + Y L + +K+K KAKYK + K KP K+
Sbjct: 315 LAKAKHKLAKAKYKLAKAKYKLAKAKYKLAKAKYK-LAKAKYKPAKA 360
>SB_45886| Best HMM Match : OEP (HMM E-Value=2)
Length = 238
Score = 27.5 bits (58), Expect = 4.5
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKLTVVVKQIRGE 237
L K K + NY L + +K+K KAKYK + N + N + + Q R
Sbjct: 165 LAKAKYKLAKANYKLAKAKYKLAKAKYKLAKAKYK-LANANTNSQMQNTNSQMQIQTRKS 223
Query: 238 K 240
K
Sbjct: 224 K 224
>SB_45094| Best HMM Match : DUF1090 (HMM E-Value=1.6)
Length = 169
Score = 27.5 bits (58), Expect = 4.5
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 28 GQACCSTCRWLTKKKSTIKPR-NYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNK 204
G+ C + ++ +ST K + NY L + +K+K KAKYK K + K
Sbjct: 35 GETCHAKQNTNSQMQSTYKHKANYKLAKAKYKLAKAKYKPAKAKYKLAKAKYKLAKAKYK 94
Query: 205 L 207
L
Sbjct: 95 L 95
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKS 198
L K K + Y L + +K+K KAKYK + K KP K+
Sbjct: 102 LAKAKHKLAKAKYKLAKAKYKLAKAKYKLAKAKYK-LAKAKYKPAKA 147
>SB_23869| Best HMM Match : rve (HMM E-Value=2.2e-16)
Length = 1456
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 252 GSPILLTSNLLYNNSQLVGLLRLRVLFANELVFSLLVEHL 133
G P ++T + + GLL+L++L N+L F +L HL
Sbjct: 493 GHPEVITEQFEEDLAVYRGLLKLKILPPNDLFFPVLPVHL 532
>SB_39148| Best HMM Match : OEP (HMM E-Value=0.33)
Length = 208
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K +KAKYK K + KL
Sbjct: 12 LAKAKYKLANAKYKLANAKFKLAKAKYKLEKAKYKLAKAKYKLAKAKYKL 61
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KA YK K NKL
Sbjct: 82 LAKAKYKLVKATYKLANAKYKLAKAKYKPAKATYKLAKAKYKLANAKNKL 131
>SB_18987| Best HMM Match : OEP (HMM E-Value=0.61)
Length = 355
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KAKYK K + KL
Sbjct: 248 LAKAKYKLANAKYKLANAKYKLAKAKYKLAKAKYKLTNAKYKLAKAKYKL 297
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
L K K + Y L N + +K+K KAKYK K
Sbjct: 311 LAKAKYKLAKAKYKLANAKYKLAKAKYKLAKAKYKLANAK 350
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
LTK K + Y L + +K+K KAKYK K
Sbjct: 157 LTKAKYKLAKAKYKLAKAKYKLAKAKYKLAKAKYKLANAK 196
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKK 177
L K K + Y L N + +K+K KAKYK K
Sbjct: 185 LAKAKYKLANAKYKLANAKYKLAKAKYKLAKAKYKLANAK 224
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 153 SLLVEHLGFGETHHSVAQ-IIVPRFYRRFF 67
S L+ H G HH VAQ ++VP YRR +
Sbjct: 1329 SHLIRHAIGGNDHHFVAQMLLVPDQYRRMW 1358
>SB_41618| Best HMM Match : OEP (HMM E-Value=0.56)
Length = 355
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KAKYK K + KL
Sbjct: 245 LAKAKYKLAKAKYKLANAKYKLAKAKYKLAKAKYKLAKAKYKLANEKYKL 294
>SB_5425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMF-----HKKAKYKFIGKKNPKPEKSNKLTVVVK 222
L K K + Y L N + +K K+ H KAKYK K + KL + K
Sbjct: 312 LAKGKYKLAKAKYKLANAKYKLAKYKLANAKYKHAKAKYKLANAKYKLAKAKYKLLAIAK 371
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +1
Query: 58 LTKKKSTIKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKL 207
L K K + Y L N + +K+K KAKYK K + KL
Sbjct: 242 LAKAKYKLAKAKYKLANAKYKLAKAKYKLAKAKYKLAKAKYKLAKAKYKL 291
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -3
Query: 219 YNNSQLVGLLRLRVLFANEL-----VFSLLVEHLGFGETHHSVAQII 94
Y NS+++ +LR + + S +EHLGF ++HH ++I
Sbjct: 755 YGNSEIMPPSQLRAMRPEFMSLSAQAISCELEHLGFNKSHHFTKELI 801
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,136,370
Number of Sequences: 59808
Number of extensions: 291372
Number of successful extensions: 877
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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