Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30800X
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   4.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   4.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.7  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          22   7.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 262 PSNVGSPSTPLRRKSVLHQVAVIQQSCAQDPI 357
           P   GSP  P R   VLH  A  QQ   Q  +
Sbjct: 128 PGQSGSPPDPTRNGIVLHHQAHQQQQQQQQQL 159


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 45   HLQVVD*EKIYDKT*EL*SGQRSDAFLQIQDVPQEG*IQVHWQK 176
            H Q++  +       EL +  R D F QIQ + QE    + W K
Sbjct: 2229 HRQLIRAKYFQSSAEELFNPLRKDTFEQIQGISQESSTDI-WHK 2271


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 45   HLQVVD*EKIYDKT*EL*SGQRSDAFLQIQDVPQEG*IQVHWQK 176
            H Q++  +       EL +  R D F QIQ + QE    + W K
Sbjct: 2230 HRQLIRAKYFQSSAEELFNPLRKDTFEQIQGISQESSTDI-WHK 2272


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +1

Query: 181 PKPEKSNKLTVVVKQIRGEKNGGTRQYPSNVGSPSTPLRRKSVLHQVAVIQQSCAQDPI 357
           P    SN+  V +  +  E +  T Q P N  +PS  +  +    Q  ++  S   D I
Sbjct: 791 PSSASSNQSRVAISPLYCEGSVPTLQSPKNAVAPSDIIFDRPPAGQTTLMSYSSNNDYI 849


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -2

Query: 160 CI*PSCGTSWIWRN-ASLRCP 101
           C   +CGT W +R+ +SL  P
Sbjct: 206 CCRKTCGTGWKYRSISSLHAP 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,247
Number of Sequences: 2352
Number of extensions: 10614
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)