Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30800X
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 45 9e-05
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 45 1e-04
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 45 1e-04
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 45 1e-04
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 35 0.091
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 34 0.16
AK126993-1|BAC86780.1| 369|Homo sapiens protein ( Homo sapiens ... 31 1.1
D76444-1|BAA19739.1| 685|Homo sapiens hkf-1 protein. 31 2.0
BC110333-1|AAI10334.1| 685|Homo sapiens ring finger protein 103... 31 2.0
BC035053-1|AAH35053.1| 685|Homo sapiens ring finger protein 103... 31 2.0
AC015971-1|AAX93079.1| 685|Homo sapiens unknown protein. 31 2.0
AB052743-1|BAB20900.1| 685|Homo sapiens KF-1 protein protein. 31 2.0
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 45.2 bits (102), Expect = 9e-05
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L GV R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCGRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 64 KKKSTIKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGKKNPKPEKSNKLTVVVK 222
KK KP RN L G+ R+S+S M+ +KA KY K K +K L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 223 QIRGEKNGGTR 255
+ G+KNGGTR
Sbjct: 95 PVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.091
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 121 FSKSKMFHKKAKYKFIGKKNPKPEKSNKLTVVVKQIRGEKNGGTR 255
+S+ M+ K KY K K +K L V K + G+KNGGTR
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 44
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 72 FSQHVRKLRASITPGTILIILTGRH 96
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 34.3 bits (75), Expect = 0.16
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 112 VMRFSKSKMFHKKAKYKFIGKKNPKPEKSNKLTVVVKQIRGEKNGGTR 255
+ S+ M+ K KY K K +K L V K + G+KNGGTR
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Score = 33.1 bits (72), Expect = 0.37
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 329 FSNHVRRIRSGLVIGNVCILLDGRH 403
FS HVR++R+ + G + I+L GRH
Sbjct: 133 FSQHVRKLRASITPGTILIILTGRH 157
>AK126993-1|BAC86780.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ45048 fis, clone BRAWH3021724, moderately
similar to Mus musculus kyphoscoliosis (Ky). ).
Length = 369
Score = 31.5 bits (68), Expect = 1.1
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 100 LGNGVMRFSK--SKMFHKKAKYKFIGKKNPKPEKSNKLTVVVKQIRGEKNGGTR-QYPSN 270
+GNGV R+ K FH + ++ P+ K ++ K+++G+KNG TR + P
Sbjct: 32 VGNGVRRWQKLEGNDFHGTQLTVEVHPRDAMPQLLKKFSLA-KRLQGDKNGNTRPRQPGG 90
Query: 271 VGSPSTPLRRKSV 309
+ + P R S+
Sbjct: 91 KDAHAYPWDRSSL 103
>D76444-1|BAA19739.1| 685|Homo sapiens hkf-1 protein.
Length = 685
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 22 SGGQACCSTCRWLTKKKSTIKPRNYDLGNGV 114
+GG+ CC CRW + KK ++ L N V
Sbjct: 653 AGGRHCCPVCRWPSYKKKQPYAQHQPLSNDV 683
>BC110333-1|AAI10334.1| 685|Homo sapiens ring finger protein 103
protein.
Length = 685
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 22 SGGQACCSTCRWLTKKKSTIKPRNYDLGNGV 114
+GG+ CC CRW + KK ++ L N V
Sbjct: 653 AGGRHCCPVCRWPSYKKKQPYAQHQPLSNDV 683
>BC035053-1|AAH35053.1| 685|Homo sapiens ring finger protein 103
protein.
Length = 685
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 22 SGGQACCSTCRWLTKKKSTIKPRNYDLGNGV 114
+GG+ CC CRW + KK ++ L N V
Sbjct: 653 AGGRHCCPVCRWPSYKKKQPYAQHQPLSNDV 683
>AC015971-1|AAX93079.1| 685|Homo sapiens unknown protein.
Length = 685
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 22 SGGQACCSTCRWLTKKKSTIKPRNYDLGNGV 114
+GG+ CC CRW + KK ++ L N V
Sbjct: 653 AGGRHCCPVCRWPSYKKKQPYAQHQPLSNDV 683
>AB052743-1|BAB20900.1| 685|Homo sapiens KF-1 protein protein.
Length = 685
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 22 SGGQACCSTCRWLTKKKSTIKPRNYDLGNGV 114
+GG+ CC CRW + KK ++ L N V
Sbjct: 653 AGGRHCCPVCRWPSYKKKQPYAQHQPLSNDV 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,725,890
Number of Sequences: 237096
Number of extensions: 1425683
Number of successful extensions: 2863
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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