Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30798X
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.18 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   0.56 
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    23   0.56 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   6.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   9.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.0 bits (52), Expect = 0.18
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 14  PDVVFVFGFKTNFGGGKSTG 73
           PD VF+  F+T+F  GK +G
Sbjct: 107 PDDVFIRKFETSFESGKPSG 126


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 0.56
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 86  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 208
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 233 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 280


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.4 bits (48), Expect = 0.56
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 86  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 208
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 15  YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 62


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 10  YSRCSVRIRFQDKLRRWQVNWI 75
           Y+   +R++FQ KL   +++W+
Sbjct: 341 YASNCLRVQFQKKLLLVELSWM 362


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 159 FFSYRPW 139
           F+ YRPW
Sbjct: 490 FYDYRPW 496


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 144 PWRANLC 124
           PWR+N C
Sbjct: 78  PWRSNYC 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,292
Number of Sequences: 336
Number of extensions: 1531
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)