Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30798X
(313 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0153 - 7258002-7258034,7258137-7258223,7258991-7259161,725... 113 2e-26
01_06_0550 - 30151494-30151526,30151620-30151706,30152458-301526... 113 2e-26
06_03_0440 + 20815528-20815653,20815742-20815912,20816501-208165... 77 2e-15
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 31 0.25
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293... 30 0.44
01_04_0061 + 15555096-15555428,15555768-15555775,15557117-15557495 30 0.44
01_01_0502 - 3688940-3689149,3689180-3689251,3690028-3690064,369... 30 0.44
07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423 28 1.8
11_04_0350 - 16658497-16659015 27 2.3
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 27 2.3
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 27 2.3
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 2.3
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 27 2.3
07_03_1630 - 28255207-28255266,28255533-28255622,28255861-282559... 27 3.1
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 27 3.1
03_01_0078 - 635026-635252,635853-635934,636081-636089 27 3.1
09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890 27 4.1
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 26 5.4
01_06_0733 - 31563246-31563462,31563721-31563947,31563983-315640... 26 5.4
12_01_0407 - 3219980-3221278 26 7.2
09_02_0157 + 5083771-5083996,5084007-5084326,5085958-5086392,508... 26 7.2
05_05_0006 + 21450739-21451434 26 7.2
04_04_1214 - 31798271-31799134,31799218-31799301,31799469-317996... 26 7.2
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 26 7.2
01_01_0903 - 7103091-7103120,7104092-7104651,7105208-7105328,710... 26 7.2
11_01_0619 - 4961588-4962409 25 9.5
09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629 25 9.5
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 25 9.5
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 25 9.5
>02_02_0153 -
7258002-7258034,7258137-7258223,7258991-7259161,
7259261-7259386
Length = 138
Score = 113 bits (273), Expect = 2e-26
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +2
Query: 23 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 202
+FVF F+T+FGGGKSTGF LIYD LD AKK+EPK+RL R+GL K +RKQ KERKNR
Sbjct: 61 IFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRA 120
Query: 203 KKVRGTKKSKVGAASKK 253
KK+RG KK+K G A KK
Sbjct: 121 KKIRGVKKTKAGDAGKK 137
>01_06_0550 -
30151494-30151526,30151620-30151706,30152458-30152628,
30152716-30152757,30152856-30152939
Length = 138
Score = 113 bits (273), Expect = 2e-26
Identities = 52/77 (67%), Positives = 61/77 (79%)
Frame = +2
Query: 23 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 202
+FVF F+T+FGGGKSTGF LIYD LD AKK+EPK+RL R+GL K +RKQ KERKNR
Sbjct: 61 IFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRA 120
Query: 203 KKVRGTKKSKVGAASKK 253
KK+RG KK+K G A KK
Sbjct: 121 KKIRGVKKTKAGDAGKK 137
>06_03_0440 +
20815528-20815653,20815742-20815912,20816501-20816584,
20818831-20818917,20819044-20819076
Length = 166
Score = 77.4 bits (182), Expect = 2e-15
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 28/105 (26%)
Frame = +2
Query: 23 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLAR-------HGLYEKK------- 160
+FVF F+T+FGGGKSTGF LIYD LD AKK+EPK+RL R +G + +
Sbjct: 61 IFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRVQLLSVGNGCFVSRGVLGIPC 120
Query: 161 -----------RPTRKQRK---ERKNRMKKVRGTKKSKVGAASKK 253
K RK ERKNR KK+RG KK+K G A KK
Sbjct: 121 EVRFGNLNGLATKVEKSRKQMKERKNRAKKIRGVKKTKAGDAGKK 165
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKY 256
+KK+ +K++K++KN+ KK + KK K K++
Sbjct: 75 KKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRW 109
>11_04_0391 +
17127309-17127449,17127886-17127950,17129209-17129305,
17129729-17130193,17130505-17130528
Length = 263
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Frame = +2
Query: 122 KHRLARH-GLYEKKRPTRKQR-KERKNRMKKVRGTKKSKV-----GAASKKYVNARY 271
KH+ + ++K RP+++QR K +K R +G + S+ G S +Y+N+RY
Sbjct: 126 KHQFPKSFEFFKKARPSQRQRNKNQKQRQTVHKGDETSETLMDVDGKKSSRYMNSRY 182
>01_04_0061 + 15555096-15555428,15555768-15555775,15557117-15557495
Length = 239
Score = 29.9 bits (64), Expect = 0.44
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 47 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLY-EKKRPTRKQRKERKNR-MKKVRGT 220
NFGGG + L+Y L+ +++++ G Y +++ ERK + +++ +
Sbjct: 100 NFGGGAAVAVGLLYRVLE-ESSHNKRNKISESGAYTSSSNQEIEEKTERKEKCLERQKAA 158
Query: 221 KKSKVG 238
K+ K G
Sbjct: 159 KQRKKG 164
>01_01_0502 -
3688940-3689149,3689180-3689251,3690028-3690064,
3691224-3691705
Length = 266
Score = 29.9 bits (64), Expect = 0.44
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 70 WIRFDLRHTRSGQEVRAQAQVSPPRPVREEEAHA 171
W R +R + G E AQ+ PPRPV + +HA
Sbjct: 155 WSRL-VRTSEHGDEQLTGAQLRPPRPVEADASHA 187
>07_01_0796 + 6265106-6265304,6265723-6265963,6266063-6266423
Length = 266
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 140 HGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
H EKK+ ++K+RK R KK + KKSK
Sbjct: 224 HKKKEKKKEKSSEKKDRKERRKK-KDKKKSK 253
>11_04_0350 - 16658497-16659015
Length = 172
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKK 226
+KK+ +K++K++K + KKVR T++
Sbjct: 36 KKKKKKKKKKKKKKKKKKKVRYTQE 60
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASK 250
EP H A + T K+R+ +MK+ + +K K G K
Sbjct: 34 EPVHNTAACNSEGENNATGKRREHNNKKMKEEKSKRKKKQGEGKK 78
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 176 QRKERKNRMKKVRGTKKSKVGAASKKYVNA 265
++KE ++ G KK+K+G+ KK +NA
Sbjct: 131 EKKEIRSDADNSEGEKKTKIGSFKKKAINA 160
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 89 DTLDLAKKFEPKHRLA-RHGLYEK-KRPTRKQ--RKERKNRMKKVRGTKKSK 232
D+ DL+ + + R RH +K KR RK+ R+ERK R + + +KSK
Sbjct: 260 DSSDLSSSSDDRRRRRKRHSKKDKHKRGKRKRDRRRERKRRKRDRKSKQKSK 311
>01_05_0740 - 24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 143 GLYEKKRPTRKQRKERKNRMKK 208
G+YE++R R+Q KER+ + K
Sbjct: 999 GVYERERNMRQQEKERRKQQSK 1020
>07_03_1630 -
28255207-28255266,28255533-28255622,28255861-28255922,
28256481-28256640
Length = 123
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 173 KQRKERKNRMKKVRGTKKSKVGAASKK 253
+ +K++KN+ K ++ K SK ASKK
Sbjct: 91 QSKKKKKNKKKNLKAAKDSKSQKASKK 117
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 92 TLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTK-KSK 232
+LD + + +H+ + +K R + + K +K + +K RGTK KSK
Sbjct: 207 SLDTSSSSDHRHKRRKSSKKDKHRSAKGKSKHKKTK-RKSRGTKRKSK 253
>03_01_0078 - 635026-635252,635853-635934,636081-636089
Length = 105
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 89 DTLDLAKKFEP--KHRLARHG-LYEKKRPTRKQRKERKNRMKKVRGTKKSKVG 238
DT+++AKK K + G E+K+P +K+ K+ + + +K K+ K G
Sbjct: 51 DTVEIAKKLRKIGKIDIVSVGPAKEEKKPEKKEEKKEEKKEEKKEEKKEEKKG 103
>09_03_0108 + 12421719-12421749,12422794-12422892,12423370-12423890
Length = 216
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +1
Query: 10 YSRCSVRIR-FQDKLRRWQVNWI 75
+ RC VR+ F KLR W ++W+
Sbjct: 134 FLRCVVRVNNFPTKLRPWDLSWL 156
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
K + +HGL +K++ +++ + KN K+ ++K +G+ KK
Sbjct: 781 KLKKRKHGLLKKQKTSKRNSRGSKN---KISNSRKLHLGSERKK 821
>01_06_0733 -
31563246-31563462,31563721-31563947,31563983-31564018,
31564750-31564862,31565872-31565950,31566739-31566956,
31567041-31567146,31568518-31568730
Length = 402
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 91 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT 189
H RSG++ R + ++SP P R+ + R+
Sbjct: 190 HQRSGEDFRQEHEISPVAPHRDVRVYVDNVVRS 222
>12_01_0407 - 3219980-3221278
Length = 432
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 164 ASSSRTGRGGLTCAWARTSWPDRVCR 87
A+ S++G+G AW R W D + +
Sbjct: 90 ATDSQSGKGKKGAAWQRMKWTDSMVK 115
>09_02_0157 +
5083771-5083996,5084007-5084326,5085958-5086392,
5087277-5087921
Length = 541
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 231 LDFLVPRTFFILFLRSLRCLRVGLFFSYRPW 139
++FL+ LFL +L +R G+FF + W
Sbjct: 461 VNFLMTTAVAQLFLATLCRMRAGIFFFFAAW 491
>05_05_0006 + 21450739-21451434
Length = 231
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 209 PSSFCSYVLYAVCAWASSSRTGRGGLTCAWARTSW 105
PSS S A A+ S+S TG T ++ SW
Sbjct: 69 PSSSASTTTTAAAAFTSTSTTGASATTVDSSKESW 103
>04_04_1214 -
31798271-31799134,31799218-31799301,31799469-31799614,
31799658-31799739
Length = 391
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 71 GFALIYDTLDLAKKFEPKHRL 133
GF L D L+ AK F+ KH+L
Sbjct: 129 GFVLGKDALERAKSFDEKHQL 149
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
E + R R +KR +++ +ERK + KK R ++ K
Sbjct: 145 EEERRRRRKDKERRKRKEKERERERKKKEKKKRRKEEKK 183
>01_01_0903 -
7103091-7103120,7104092-7104651,7105208-7105328,
7105545-7106567
Length = 577
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 158 KRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVN 262
+R + KQR R ++ R KSK G+AS+ N
Sbjct: 254 RRSSDKQRPHSTYRNREGRKDTKSKTGSASRSSAN 288
>11_01_0619 - 4961588-4962409
Length = 273
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAAS 247
+K+RP RKQ+K R R + +S +AS
Sbjct: 220 KKRRPKRKQQKRRHRRETSSSASSESDSESAS 251
>09_02_0170 - 5273607-5273929,5274272-5274350,5274627-5274629
Length = 134
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSK 232
EKK K++KE++ + KK + K+ K
Sbjct: 77 EKKEKEEKEKKEKEEKEKKEKEEKEKK 103
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 277 SLIPSIHILLGGRTYFRFLGTADLLHSV-LTFFTLF 173
S + S+ + LGG++ F + AD+ H+V L F LF
Sbjct: 308 SNLKSVTLELGGKSPFIIMDDADVDHAVELAHFALF 343
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 98 DLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
+LAKK + HRL G K K+++E + + + K + ++ KK
Sbjct: 255 ELAKKNKFSHRLGSAGYAPKVEQWTKEKEEMRKKGQPSVADKIENLSSSQKK 306
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,469,790
Number of Sequences: 37544
Number of extensions: 166792
Number of successful extensions: 641
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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