Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30798X
(313 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 31 0.19
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 31 0.19
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.58
SB_6351| Best HMM Match : IncA (HMM E-Value=0.13) 29 0.58
SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4) 29 0.77
SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37) 29 0.77
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 0.77
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_19255| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 1.3
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 1.3
SB_22216| Best HMM Match : PGAMP (HMM E-Value=4) 28 1.8
SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_19185| Best HMM Match : DUF1269 (HMM E-Value=0.28) 27 2.3
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 27 3.1
SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_53566| Best HMM Match : Glycophorin_A (HMM E-Value=9.1) 27 4.1
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 27 4.1
SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 27 4.1
SB_43079| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_17041| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_44120| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 26 5.4
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 26 7.2
SB_59269| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 26 7.2
SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_6491| Best HMM Match : Vicilin_N (HMM E-Value=0.099) 26 7.2
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4) 25 9.5
SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 25 9.5
SB_37766| Best HMM Match : IncA (HMM E-Value=0.4) 25 9.5
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 25 9.5
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +2
Query: 152 EKKRPTR--KQRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
E K+PT+ K RK K+++ KV KKSK+G SK+ N++
Sbjct: 135 ENKKPTKDEKTRKVLKSKLDKVEKKKKSKLG-KSKEAKNSK 174
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
+KK+ + KE KN K V G KK + A SKK
Sbjct: 158 KKKKSKLGKSKEAKNSKKSVVGKKKHEKKAESKK 191
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 68 TGFALIYDTLDLAK--KFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
T +I + LAK K H+L KK+ +K++ ++K + K+ KSK
Sbjct: 274 TSAGVIKKPIKLAKVMKMIRAHKLTPAKPVNKKKNDKKEQTQQKEKKNKINNDVKSK 330
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 31.1 bits (67), Expect = 0.19
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
K + +HR L ++R K++ +R + R + KSK SKKY +R
Sbjct: 271 KSRKHRHRSRSSSLSSRRRSKHKRKSKRDRSRSRDRSSSKSKSLRRSKKYSRSR 324
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 155 KKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
+++P + KE+K +KK +G +KS SKK
Sbjct: 473 EEKPKHARNKEKKKEVKKKKGKEKSTTSGTSKK 505
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKK 208
E PT+KQ K+RK R K+
Sbjct: 218 ETPEPTKKQTKKRKRRRKR 236
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.5 bits (63), Expect = 0.58
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 235
E K + + +KK+ +K++K +KN+ K + KK K+
Sbjct: 16 EKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKM 55
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
K+ + K + + +KK+ K+ K+ KN+ KK + KK K
Sbjct: 18 KRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKK 59
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
+KK+ +K++K++KN+ K K K KK
Sbjct: 25 KKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKK 58
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNA 265
KK + K + + +KK+ + ++ + KN+ KK KK + +K + A
Sbjct: 20 KKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEA 72
>SB_6351| Best HMM Match : IncA (HMM E-Value=0.13)
Length = 417
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 235
+H LA H +++RP+ R+ K R++K+R S+V
Sbjct: 378 RHGLASHDKKKRERPSLVARERMKKRLRKIREEFGSEV 415
>SB_18070| Best HMM Match : V-ATPase_G (HMM E-Value=4)
Length = 166
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVR 214
+H LA H +++RP+ R+ K R++K+R
Sbjct: 79 RHGLASHDKKKRERPSLVARERMKKRLRKIR 109
>SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)
Length = 1376
Score = 29.1 bits (62), Expect = 0.77
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 95 LDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKV 211
LDL KHR RH EKK K RK +KN M+++
Sbjct: 1000 LDLLLAHATKHRGRRHRS-EKKEKANKARKCQKNYMRRL 1037
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +2
Query: 104 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
AK+ + + RL + EKK R ++K+R+ + + + KK + ++ +NA+
Sbjct: 346 AKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAK 400
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 155 KKRPTRKQRKERKNRMKKVRGTKKSK 232
KKR +KQ+K++K R KK + +K K
Sbjct: 3 KKRKKKKQKKKKKKRKKKKQKKQKKK 28
>SB_19255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 92 TLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASK 250
T D+ + E R A+ G E+K+ ++RKE + R +K +KS + A +K
Sbjct: 149 TEDVIEALEDTQR-AKGGEEERKKKMEQERKEFEMRKRKAEVLQKSALEAEAK 200
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
+K + + RLA E+KR ++RKE++ + K++ +K +
Sbjct: 202 RKLQEEARLAAQRALEEKRKLEEERKEQERKEKELAELEKKR 243
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRK--ERKNRMKKVRGTKKSKVGAASKKYVNA 265
E K R + E+K+ +K+RK ++K R K+ + +K + A KK+ ++
Sbjct: 39 EKKERRKKERKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKKFTDS 90
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQR-KERKNRMKKVRGTKKSK 232
+K E K + E+K+ +K+R KERK KK R + K
Sbjct: 44 RKKERKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKK 86
>SB_22216| Best HMM Match : PGAMP (HMM E-Value=4)
Length = 132
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -3
Query: 182 YAVCAWASSSRTGRGGLTCAWARTSWPDRVCRRSKRIQL-TCHLRS 48
Y CA S G+ C +A + PD RRS R T H RS
Sbjct: 62 YGTCAMPDSGIPPPPGVLCRYAPCAMPDPKMRRSNRSSSGTTHNRS 107
>SB_16395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 119 PKHRLARHGLYEKKRPTRKQRKERKNRMKK 208
P+ L H L ++ R R+QR ER++R+K+
Sbjct: 21 PQQILFTHRLEQRYRVERRQRLERRHRVKR 50
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 119 PKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
PK ++ + + + K+ KQ ERK +M++ + K+ V K+
Sbjct: 624 PKEKVRHYDVDQVKKYMEKQLAERKKKMRQEKEMKRKAVEERKKR 668
>SB_19185| Best HMM Match : DUF1269 (HMM E-Value=0.28)
Length = 407
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 235
+HRLA +K P+ + R++ K R++++R SKV
Sbjct: 368 RHRLAPSDKKSRKGPSPEAREKIKKRLREIREEFGSKV 405
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 110 KFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 214
KFEPKH+ + KKR +RK+ E + + + +R
Sbjct: 1060 KFEPKHK-KKGRSSSKKRHSRKKGHEEQQKKETIR 1093
>SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 128 RLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
R R G K P + RKE NR++KV + K
Sbjct: 59 RRGRKGHRNHKEPHNRNRKEPGNRIRKVEHNRNRK 93
>SB_53566| Best HMM Match : Glycophorin_A (HMM E-Value=9.1)
Length = 199
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVN 262
++KR R+ R + + +KK R +V + +KY N
Sbjct: 91 DRKRNLRQTRLDMRTPLKKTRNAPLERVTSDGRKYYN 127
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVN 262
++KR R+ R + + +KK R +V + +KY N
Sbjct: 1444 DRKRNLRQTRLDMRTPLKKTRNAPLERVTSDGRKYYN 1480
>SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1124
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 176 QRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
Q+ + KK++ K+SK+ + KK +NA+
Sbjct: 268 QKPNERRPKKKLKYKKRSKINSHKKKLINAK 298
>SB_43079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKV 235
EK K++KE+K + +K TKK KV
Sbjct: 320 EKSDGEGKKKKEKKEKSEKTEDTKKVKV 347
>SB_17041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 170 RKQRKERKNRMKKVRG--TKKSKVGAASK 250
R ++K+RKN+ V G TKK+K SK
Sbjct: 15 RTRKKKRKNKCNNVNGRETKKNKTSKTSK 43
>SB_44120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 149 YEKKRPTRKQRKERKNRMKKVRGTKKSKVGA 241
Y+ K+ T+KQRK + + K+ KK GA
Sbjct: 67 YKTKQSTKKQRKVLRGQKKRKDDQKKQAEGA 97
>SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNARY 271
KKF+ ++ L +K+ +Q KER+ +K R ++ + G + + + Y
Sbjct: 56 KKFKDNYKDPAEILRKKREERERQEKERRKALKIEREKEQERQGIILPEIIYSDY 110
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 134 ARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
A GL KKR R RK KNR K R +K K
Sbjct: 347 AEQGL-GKKRRGRAARKAAKNRKKNKRQKRKKK 378
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVN 262
+ + P +KQ+KE+ R KK +G V AS Y++
Sbjct: 470 KSRSPAKKQKKEKVPRKKKAKG-DGPVVKRASSAYIH 505
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 143 GLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 235
G +K + T KQ KE++ K+ + +KSKV
Sbjct: 831 GKVDKGKGTEKQEKEKEKIQKEEKEPEKSKV 861
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -1
Query: 175 FARGPLLLVQAVAG*PVLGLELLGQIECVVDQSESS*LATSEVCLETE 32
F +G L + V ++GLEL +I+ ++D++ S CL +E
Sbjct: 56 FFQGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACLPSE 103
>SB_31531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 137 RHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKY 256
R LYEK + +E+ R ++ R T K+K+ K+Y
Sbjct: 107 RKRLYEKCHQETPRTQEKARRGERERTTNKAKLLLKKKRY 146
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSK 232
EKKR +K+R+E K+ +K R +K SK
Sbjct: 888 EKKRKEKKRRRE-KDSSEKTRVSKSSK 913
>SB_59269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 220 GTADLLHSVLTFFTLFARGPLLLVQ 146
G +L S + FF LFA+G +L Q
Sbjct: 719 GKRRVLKSAIAFFELFAKGAILFCQ 743
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
K R R ++KR ++QR+ ++ R +K + +K K
Sbjct: 1131 KRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRK 1167
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 122 KHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
K R R ++KR ++QR+ ++ R +K + +K K
Sbjct: 1059 KRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRK 1095
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E K + + ++++ K RKE K R K+ TKK + + K+
Sbjct: 135 EEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKKEEKESREKE 180
>SB_6719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 101 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 208
++KK + K + ++ K+ RKQRK + R+K+
Sbjct: 394 VSKKLKKKRKKKKNRKLRKRNRKRKQRKLARKRLKE 429
>SB_6491| Best HMM Match : Vicilin_N (HMM E-Value=0.099)
Length = 297
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 28 RIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVSPPRPVREEE---AHAQTA*RT*EQ 198
R++ Q K RRW F + + QE+R + + R +++E A QT R +Q
Sbjct: 47 RLQRQGKSRRWTGRRSAFPRKGSIQQQEIRGALEQTTTRAYQQQEIRGALEQTTTRAYQQ 106
Query: 199 NE 204
E
Sbjct: 107 QE 108
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = -2
Query: 198 LFLRSLRCLRVGLFFSYRPWRANLCLGSNFLARSSVS*IKANPVDLPPPK 49
L L L CL R +R + C SN LAR + KA PPPK
Sbjct: 48 LVLNKLLCLNTVSTRIKRYYRCHSCNDSNALARRVCTTCKA---PFPPPK 94
>SB_38155| Best HMM Match : DUF414 (HMM E-Value=4.4)
Length = 361
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 73 IRFDLRHTRSGQEVRAQAQVSPPRPVREEEAH 168
I+ +H R VR +QVS P++++ H
Sbjct: 269 IKVKPKHRRPPSRVRTSSQVSTEPPIKKDPTH 300
>SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYV 259
E+++ RKQR+ERK + K+ + + ++ +K +
Sbjct: 300 ERRKEARKQREERKKKEKEQKREEIKRMKNLKRKEI 335
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+K +K +KE+K++ K+ ++ +K + +K
Sbjct: 255 ERKERKKKNKKEKKHKSKETSSSESNKSSDSEEK 288
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/50 (22%), Positives = 27/50 (54%)
Frame = +2
Query: 77 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 226
A + +T++L ++ + K A H L+E + K + E +++ ++ +K
Sbjct: 1917 AQLEETMNLKEELQDKLHTAEHELFEARTSEEKAKIEHRDKDIELAALRK 1966
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 101 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAA 244
+ ++FE + R +K+RP ++R+ R++ R + + VGAA
Sbjct: 142 MRERFEREQEKDRERDRDKERPRERRREGRRDDDDYHRPSSRRSVGAA 189
>SB_37766| Best HMM Match : IncA (HMM E-Value=0.4)
Length = 585
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 86 YDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 214
Y+ L A + P LA H K P+ R+ KNR++K+R
Sbjct: 536 YNALKTAIRARPG--LAPHDKKSGKGPSLVARERMKNRLQKIR 576
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 25.4 bits (53), Expect = 9.5
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +2
Query: 155 KKRPTRKQRKERKNRMKKVRGTKKSK 232
++RP R+QR+ R+ R ++ R ++ +
Sbjct: 478 RRRPIRRQRRRRRRRRRRRRRQRRRR 503
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,476,450
Number of Sequences: 59808
Number of extensions: 180682
Number of successful extensions: 690
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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