Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30798X
         (313 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   0.87 
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   2.0  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   2.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   2.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   4.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   6.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   6.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    21   8.1  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 263 HSHTSWRPHL 234
           H H SWRPH+
Sbjct: 748 HDHLSWRPHV 757


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 86  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 208
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 229 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 276


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 86  YDTLDLAKKFEPKHRLAR-------HGLYEKKRPTRKQRKERKNRMKK 208
           Y TL+L K+F   H L R       H L   +R  +   + R+ ++KK
Sbjct: 246 YQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 263 HSHTSWRPHL 234
           H H SW+PH+
Sbjct: 745 HDHLSWKPHV 754


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +2

Query: 152 EKKRPTRKQRKERKNRMKKV 211
           +KK PT+KQ K+ + ++ K+
Sbjct: 402 QKKLPTKKQHKQLQAQLDKL 421


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 269 T*HSHTSWRPHL 234
           T H H SW PH+
Sbjct: 803 TLHDHLSWLPHV 814


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 263 HSHTSWRPHL 234
           H H  WRPH+
Sbjct: 742 HDHFLWRPHV 751


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 263 HSHTSWRPHL 234
           H+H SW PH+
Sbjct: 814 HAHLSWVPHV 823


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 263 HSHTSWRPHL 234
           H H SW PH+
Sbjct: 758 HDHLSWIPHV 767


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,808
Number of Sequences: 2352
Number of extensions: 6437
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20316549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)