Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30798X
(313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 121 1e-28
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 42 9e-05
Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical pr... 30 0.39
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 29 0.68
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 29 0.68
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 0.68
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 29 0.90
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 29 0.90
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 29 0.90
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 1.2
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 1.2
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 1.2
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 1.2
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 1.2
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 28 1.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 1.2
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine re... 28 1.6
AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical ... 27 2.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 2.8
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 27 2.8
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 27 3.6
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 27 3.6
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 27 3.6
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 27 3.6
AF024503-4|AAG24097.1| 330|Caenorhabditis elegans Serpentine re... 27 3.6
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 26 4.8
U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box... 26 4.8
U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical pr... 26 4.8
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 26 4.8
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 26 4.8
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 26 4.8
AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm rece... 26 4.8
Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical pr... 26 6.4
U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 26 6.4
Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 25 8.4
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 25 8.4
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 25 8.4
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 25 8.4
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 25 8.4
AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical... 25 8.4
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 121 bits (291), Expect = 1e-28
Identities = 57/84 (67%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 YKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQ 178
YK TPD V FGF++ GGGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQ
Sbjct: 48 YKTTPDTVIPFGFESKIGGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQ 107
Query: 179 RKERKNRMKKVRGTKKSKVGAASK 250
RKERKNR KKVRGT K+KV A K
Sbjct: 108 RKERKNRQKKVRGTAKAKVSAGKK 131
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 41.9 bits (94), Expect = 9e-05
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRP-TRKQRKERKNRMKKVRGTKKSKVGAAS 247
GF L+YDT D A K++P+H G + +R++ K R+ + KV ++ A
Sbjct: 54 GFTLVYDTFDFANKYQPEHSSNHDGASTSRTSISRRKEKRRREQAPKVPEPTADEIEAKE 113
Query: 248 KKY 256
++Y
Sbjct: 114 EEY 116
>Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical
protein F28D1.8 protein.
Length = 360
Score = 29.9 bits (64), Expect = 0.39
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASK 250
+KK+ T+K K++K+ K +G KKSKV K
Sbjct: 309 KKKKKTKKGGKKKKSGAGKGKGKKKSKVSKEKK 341
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 83 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
I LD KK E KHR + +KK + +KE+ K+ + K + KK
Sbjct: 17 ILKKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKK 73
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 83 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
I LD KK E KHR + +KK + +KE+ K+ + K + KK
Sbjct: 64 ILKKLDEKKKTEEKHRAKQERQAQKKGAKEQAKKEKAELKKEAKELLKKEKAEERKK 120
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 0.68
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
+KK+ +K +K +K++ K+ + KKSK K+ AR
Sbjct: 291 KKKKKVKKSKKSKKDKKKEKKEKKKSKKANKEKEERRAR 329
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 0.90
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQ--RKERKNRMKKVRGTKKSKVG 238
KK EPK ++ EKK T+K+ ++E+K +K ++SK G
Sbjct: 68 KKEEPKEKVPEKKEEEKKDATKKEEAKEEKKEEERKEEKKEESKEG 113
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 28.7 bits (61), Expect = 0.90
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERK-NRMKKVRGTKKSKVGAASKK 253
KK E + A EKK R++RKE++ + KK + G++SK+
Sbjct: 470 KKHETEEERAERKRKEKKEKERQERKEKEHDEQKKRHRDNEEGAGSSSKR 519
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.7 bits (61), Expect = 0.90
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 143 GLYEKKRPTRKQRKERKNRMKKV-RGTKKSKVGAASKKYVNAR 268
G +EK RK +KE R+KK+ KK K A K + A+
Sbjct: 950 GKFEKALEQRKAKKEEAERLKKLEEKLKKEKEKQAEKDRIEAK 992
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 820 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 851
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1111 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1142
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1126 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1157
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1126 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1157
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 820 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 851
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1111 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1142
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1126 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1157
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+KR +K+R ERK +KVR KK++ KK
Sbjct: 1126 ERKREKKKERDERKKEKEKVR--KKAEKEKLKKK 1157
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
EKK + ++KE+ + KK +KKSK KK
Sbjct: 141 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKK 174
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 EKKRPTRKQRK-ERKNRMKKVRGTKKSKVGAASKK 253
EKK + ++K E+K + KK + + KSK SK+
Sbjct: 137 EKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKR 171
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 91 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGP 213
H R+ + R + V PP+ E E A A EQN GP
Sbjct: 26 HLRNEELHRFRQAVPPPQQAEEAEEEADVAENVVEQNRLGP 66
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
EKK + ++KE+ + KK +KKSK KK
Sbjct: 137 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKK 170
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E+K+ +K K+ + + +K +KKSK + SKK
Sbjct: 128 EEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKK 161
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 EKKRPTRKQ-RKERKNRMKKVRGTKKSKVGAASKK 253
EKK +K +KE K++ KK + +KKSK KK
Sbjct: 159 EKKDDEKKDDKKEAKSKSKKSKKSKKSKKSKREKK 193
>AF024503-5|AAG24096.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein246 protein.
Length = 330
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 270 YLAFTYFLEAAPTLDFLVPRTFFILFLRSLRCLRV 166
YL FT+F A ++ + +FILFL++ + RV
Sbjct: 97 YLGFTFFALQATSIMAVYENRYFILFLKTSQWSRV 131
>AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical
protein Y51A2A.6 protein.
Length = 140
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +2
Query: 38 FKTNFGGGKSTGFALI----YDTLDLAKKFEPKHRLARHGLYEKKRPTRKQR 181
F N GGGK+ GF+ + + KK H HG + RPTR R
Sbjct: 21 FVKNNGGGKNHGFSSASSSSSSSSEEGKKHGHGHHHHNHGRPSRPRPTRPPR 72
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 104 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
+KK E K +L+ E K + ++ ERK KK +KSK
Sbjct: 101 SKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSK 143
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
KK E K EKK ++++KE K KK +KS + KK
Sbjct: 241 KKDEKKEAKKEEKKEEKKEEKKEEKKEEKKDDKKEDDKEKSATKSEDKK 289
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 EKKRPTRKQ-RKERKNRMKKVRGTKKSKVGAASKK 253
EKK +K +KE K++ KK +KKSK KK
Sbjct: 150 EKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREKK 184
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 208 LLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLG 104
L+ + + FFT F P+L++ AG P+ L +LG
Sbjct: 57 LVGAFVDFFTSFLTAPVLILPVCAGYPLGVLGMLG 91
>Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical
protein AH6.3 protein.
Length = 230
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E K+P K+ K +G+KKSK SKK
Sbjct: 78 EAKKPDPANSKKSNKSKKPEKGSKKSKKSEKSKK 111
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 155 KKRPTRKQRKERKNRMKKVRGTKKSK 232
KK+ K+ KE+K + KK + +KK K
Sbjct: 762 KKKKKDKKEKEKKKKSKKSKKSKKEK 787
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 104 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYV 259
AKK E K EKK ++++KE KN K ++ K +K V
Sbjct: 168 AKKEEKKEEKKEEKKEEKKEEKKEEKKEEKNDENKEEKKEEKKDEKKEEKKV 219
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 206 SSFCSYVLYAVCAWASSSRTGRGGLTC 126
+SFC+Y L+ CA + + GG C
Sbjct: 99 ASFCNYPLFVFCAGSIGLGSWMGGCVC 125
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYVNAR 268
E RLA+ Y++KR + + +E + R+K+ KK + S+ N R
Sbjct: 89 ETHTRLAKAADYKRKRCSEETEEEYRERLKRQAERKKMERMQESEDQANNR 139
>AF024503-4|AAG24097.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein245 protein.
Length = 330
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 270 YLAFTYFLEAAPTLDFLVPRTFFILFLRSLRCLRV 166
Y FT+F A ++ + +FILFL+S + RV
Sbjct: 97 YFGFTFFALQAISIMAVYENRYFILFLKSSQWSRV 131
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 101 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 214
L K+ + + +L + EKK+ + ++KERK K+ R
Sbjct: 125 LEKQRKKEKKLKKKAKKEKKKAKKLEKKERKKERKEKR 162
>U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box
protein 2 protein.
Length = 267
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKKYV 259
EKK+P RK+RKNR +K + +K AA V
Sbjct: 184 EKKKP----RKQRKNRNRKSKAQQKGAGDAADSSAV 215
>U80439-7|AAB37644.1| 344|Caenorhabditis elegans Hypothetical
protein C01G8.6 protein.
Length = 344
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = -2
Query: 162 LFFSYRPWRANLCLGS---NFLARSSVS*IKANPVDLPPPKFVLKPNTNTT 19
LF + P R N GS A SV+ NP PPP V K N T
Sbjct: 254 LFHPFPPSRCNSSNGSYASTVTASPSVASYSPNPSQPPPPVAVAKLNMKMT 304
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 88 RHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 225
RH R +E+R Q Q R ++EE Q +Q E+ + +E
Sbjct: 544 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQKEDEAKMEE 589
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 88 RHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 225
RH R +E+R Q Q R ++EE Q +Q E+ + +E
Sbjct: 558 RHDREREEMRLQKQKDEERRKKDEEERIQKENDEKKQKEDEAKMEE 603
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 277 SLIPSIHILLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQ 146
S+IP++ ++LG TY + A ++ + L +F+ PL VQ
Sbjct: 39 SIIPTVELVLGTITYLVIIAMA-VVGNTLVVVAVFSYRPLKKVQ 81
>AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm
receptor protein 112 protein.
Length = 346
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 280 YSLIPSIHILLGG--RTYFRFLGTADLLHSVLTFFTLF 173
++L SI+I+L G RT + LGT L S +FF++F
Sbjct: 18 FTLTISINIILLGLIRTRGKTLGTYKYLMSFFSFFSIF 55
>Z81016-2|CAB02663.1| 246|Caenorhabditis elegans Hypothetical
protein F21G4.4 protein.
Length = 246
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 158 KRPTRKQRKERKNR--MKKVRGTKKSKVGAASK 250
K+ K RKE K K +R TKK+KVG K
Sbjct: 118 KQMQAKHRKEIKEAEMAKTIRSTKKTKVGKNGK 150
>U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical
protein K07E12.2 protein.
Length = 91
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 143 GLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
G + K TRK KE+K KK+ K ++ + + K
Sbjct: 25 GKWFKGVETRKSNKEKKKNSKKIEDAKNNEGSSGALK 61
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
E P +K+ KE+KN+ +K K K KK
Sbjct: 521 ENIEPKKKESKEKKNKREKKEKPVKEKAVKKGKK 554
>Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical
protein F53H2.1 protein.
Length = 914
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 98 DLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
D +KF+ + + + L K+ +R+E + + K+R K K
Sbjct: 680 DFHRKFQEQTKRNQEELRRKREERAARRREHEEELSKMRQESKQK 724
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 83 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 226
+ D A K + K R+ + KK K R+E+K + KKV KK
Sbjct: 96 LLDVKKTASKEDDKKRMDKKDP-SKKLSKEKLREEKKEQSKKVNKEKK 142
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +2
Query: 152 EKKRPTRKQRKER----KNRMKKVRGTKKSKVGAASKKY 256
EK+R K+R+ER +++ ++ R KK+K+G +++
Sbjct: 517 EKERLIEKERRERDQRRRDKKREKRERKKAKLGKRKRRH 555
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 107 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 235
+K+ ++R ++ L +K ++KER +KK R KK K+
Sbjct: 744 QKYRLRYRKKKYQL--RKGALNMEQKERMRELKKRRRMKKQKI 784
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 25.4 bits (53), Expect = 8.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 116 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKVGAASKK 253
+PK H + +K +K + NR KK+ T+K K A K
Sbjct: 7 KPKKHQHHHHHHHQKGSVALPKKSKNNRKKKI--TRKEKSNTALNK 50
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 104 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 232
+KK E K +++ E K + ++ E+K KK +KSK
Sbjct: 95 SKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSK 137
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 20 VVFVFGFKTNFGGGK 64
+VF+FGF+ FG G+
Sbjct: 115 IVFIFGFERRFGDGR 129
>AC024817-28|AAY86305.1| 103|Caenorhabditis elegans Hypothetical
protein Y54G2A.49 protein.
Length = 103
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 152 EKKRPTRKQRKERKNRMKKVRGTKKSK 232
+K+R T+K RK RK K RG++K +
Sbjct: 33 KKRRKTKKHRKRRKK--KPSRGSRKRR 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,921,893
Number of Sequences: 27780
Number of extensions: 134270
Number of successful extensions: 806
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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