Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30795
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 92 5e-19
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 92 5e-19
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 86 3e-17
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 45 5e-05
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 44 1e-04
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 39 0.003
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 39 0.003
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 32 0.39
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 32 0.39
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.89
01_01_0697 - 5389071-5389487,5390301-5390390,5390472-5390536,539... 30 1.6
02_02_0032 - 6227556-6227926,6228322-6231085 30 2.1
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 28 6.3
01_01_0191 - 1669631-1669924 28 6.3
09_01_0173 + 2495864-2496312,2497420-2497457,2497915-2498123,249... 28 8.3
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 91.9 bits (218), Expect = 5e-19
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A L
Sbjct: 29 PKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNL 88
Query: 525 FKIL 514
FK+L
Sbjct: 89 FKML 92
Score = 88.2 bits (209), Expect = 6e-18
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKG
Sbjct: 124 KPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/48 (50%), Positives = 40/48 (83%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG++VH+KT + L LT V++ D+ FSK++EAIK NFN+++++
Sbjct: 177 KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDE 224
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+RK WGGGV+G+KS
Sbjct: 225 VRKKWGGGVMGSKS 238
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 91.9 bits (218), Expect = 5e-19
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLDK A L
Sbjct: 13 PKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNL 72
Query: 525 FKIL 514
FK+L
Sbjct: 73 FKML 76
Score = 70.9 bits (166), Expect = 9e-13
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 275
+P ++ G N VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM +
Sbjct: 108 KPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/40 (47%), Positives = 32/40 (80%)
Frame = -2
Query: 236 LVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+VH+KT + L LT V++ D+ FSK++EAIK NFN+++++
Sbjct: 155 IVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDE 194
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+RK WGGGV+G+KS
Sbjct: 195 VRKKWGGGVMGSKS 208
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/55 (69%), Positives = 47/55 (85%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
+P ++ G + VT L+E+ KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKG
Sbjct: 109 KPIVVKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 163
Score = 84.2 bits (199), Expect = 9e-17
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDK 544
PK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLDK
Sbjct: 30 PKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLDK 83
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/48 (50%), Positives = 41/48 (85%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG++VH+KT + L LT V++ D+ FSK++EAIK+NFN+++++
Sbjct: 162 KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKSNFNDKFDE 209
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+RK WGGG++G+KS
Sbjct: 210 VRKKWGGGIMGSKS 223
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPA 245
++ G N TK + + A+ VV+A D +P+E++L LP L VPY V A
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQA 86
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPA 245
++ G N TK + + ++ VV+A D +P+E++L LP L VPY V A
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQA 88
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPASVHLYT 227
++ G V K + + + L +IA ++ PI+++ +P LC + +PY V P+ L T
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYV---PSKEDLAT 101
Query: 226 A 224
A
Sbjct: 102 A 102
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPASVHLYT 227
++ G V K + + L VIA ++ PI+++ +P LC + +PY V P+ L T
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYV---PSKEDLAT 101
Query: 226 A 224
A
Sbjct: 102 A 102
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 397 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 275
G K +EK AQL V+A D D + V + ALC + V
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNV 81
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 397 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGV 275
G K +EK AQL V+A D D + V + ALC + V
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNV 81
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 628 PHPAPEGCTSASSESAPSDQP 566
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>01_01_0697 -
5389071-5389487,5390301-5390390,5390472-5390536,
5391106-5391176,5391297-5391335,5392938-5393350
Length = 364
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +2
Query: 503 PVFSKILKRP----LAVVLSSV--WVNWLIGGGTFRRR 598
PVF +L R LAV L S+ WV L+GGG +RRR
Sbjct: 23 PVFRSVLSRRALLRLAVALHSLLLWVFLLVGGGGWRRR 60
>02_02_0032 - 6227556-6227926,6228322-6231085
Length = 1044
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 309 SSCQRYAVKWAYHTALSREVPPRCT-CTPQDMHMLSSNK 196
+SC+ V ++ +L E+PP T CT MLS+NK
Sbjct: 147 TSCRNLQVLGLWNNSLQGEIPPSLTQCTHLQQVMLSNNK 185
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 5 YSAQPCFCANSRALAFSSLA---MRALDLLPRTPPPQCL 112
Y A PCFCA + + LA ++AL + + P CL
Sbjct: 175 YGAIPCFCARLLTIEYMDLAEQSLQALKKISQEHPTACL 213
>01_01_0191 - 1669631-1669924
Length = 97
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 503 PVFSKILKRPLAVVLSSVWVNWLIGGG 583
P + + +R LA++L W WL GGG
Sbjct: 5 PATTPLPRRRLALILCLAWALWLHGGG 31
>09_01_0173 +
2495864-2496312,2497420-2497457,2497915-2498123,
2498894-2499205
Length = 335
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 648 VRWPKYIRIQRQKAV-----LQRRLKVPPPINQFTQTLDKTTAKGLFKILEN 508
VR PK ++I+ + + L + +P F Q +D T KG+F +EN
Sbjct: 225 VRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIEN 276
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,325
Number of Sequences: 37544
Number of extensions: 384830
Number of successful extensions: 1369
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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