Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30795
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 120 1e-27
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 120 1e-27
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 120 1e-27
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 120 1e-27
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 120 1e-27
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 55 1e-07
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 55 1e-07
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 41 0.002
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 41 0.002
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 41 0.002
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 34 0.16
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 34 0.16
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 34 0.16
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 34 0.16
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 33 0.50
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 33 0.50
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 33 0.50
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 33 0.50
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 33 0.50
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 33 0.50
AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p pro... 29 8.1
AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA... 29 8.1
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 120 bits (290), Expect = 1e-27
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA L
Sbjct: 41 PKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL 100
Query: 525 FKILE 511
FK+LE
Sbjct: 101 FKLLE 105
Score = 105 bits (252), Expect = 6e-23
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = -3
Query: 526 FQDFGEYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKKKAQLV 347
F+ +YRPE+ K+P+ + +GTNTVTKL+E+KKAQLV
Sbjct: 101 FKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLV 160
Query: 346 VIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
VIAHDVDP+ELVLFLPALCRKMGVPYCIVKG
Sbjct: 161 VIAHDVDPLELVLFLPALCRKMGVPYCIVKG 191
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+E+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237
Score = 31.9 bits (69), Expect = 0.87
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 120 bits (290), Expect = 1e-27
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA L
Sbjct: 41 PKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL 100
Query: 525 FKILE 511
FK+LE
Sbjct: 101 FKLLE 105
Score = 105 bits (252), Expect = 6e-23
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = -3
Query: 526 FQDFGEYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKKKAQLV 347
F+ +YRPE+ K+P+ + +GTNTVTKL+E+KKAQLV
Sbjct: 101 FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLV 160
Query: 346 VIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
VIAHDVDP+ELVLFLPALCRKMGVPYCIVKG
Sbjct: 161 VIAHDVDPLELVLFLPALCRKMGVPYCIVKG 191
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+E+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237
Score = 31.9 bits (69), Expect = 0.87
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 120 bits (290), Expect = 1e-27
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA L
Sbjct: 41 PKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL 100
Query: 525 FKILE 511
FK+LE
Sbjct: 101 FKLLE 105
Score = 105 bits (252), Expect = 6e-23
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = -3
Query: 526 FQDFGEYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKKKAQLV 347
F+ +YRPE+ K+P+ + +GTNTVTKL+E+KKAQLV
Sbjct: 101 FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLV 160
Query: 346 VIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
VIAHDVDP+ELVLFLPALCRKMGVPYCIVKG
Sbjct: 161 VIAHDVDPLELVLFLPALCRKMGVPYCIVKG 191
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+E+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237
Score = 31.9 bits (69), Expect = 0.87
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 120 bits (290), Expect = 1e-27
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA L
Sbjct: 41 PKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL 100
Query: 525 FKILE 511
FK+LE
Sbjct: 101 FKLLE 105
Score = 105 bits (252), Expect = 6e-23
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = -3
Query: 526 FQDFGEYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKKKAQLV 347
F+ +YRPE+ K+P+ + +GTNTVTKL+E+KKAQLV
Sbjct: 101 FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLV 160
Query: 346 VIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
VIAHDVDP+ELVLFLPALCRKMGVPYCIVKG
Sbjct: 161 VIAHDVDPLELVLFLPALCRKMGVPYCIVKG 191
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+E+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237
Score = 31.9 bits (69), Expect = 0.87
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 120 bits (290), Expect = 1e-27
Identities = 54/65 (83%), Positives = 60/65 (92%)
Frame = -1
Query: 705 PKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGL 526
PKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA L
Sbjct: 41 PKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKL 100
Query: 525 FKILE 511
FK+LE
Sbjct: 101 FKLLE 105
Score = 105 bits (252), Expect = 6e-23
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = -3
Query: 526 FQDFGEYRPETXXXXXXXXXXXXXXXXXXXXXXXXKRPNTIRSGTNTVTKLVEKKKAQLV 347
F+ +YRPE+ K+P+ + +GTNTVTKL+E+KKAQLV
Sbjct: 101 FKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLV 160
Query: 346 VIAHDVDPIELVLFLPALCRKMGVPYCIVKG 254
VIAHDVDP+ELVLFLPALCRKMGVPYCIVKG
Sbjct: 161 VIAHDVDPLELVLFLPALCRKMGVPYCIVKG 191
Score = 74.5 bits (175), Expect = 1e-13
Identities = 32/48 (66%), Positives = 42/48 (87%)
Frame = -2
Query: 260 QGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYED 117
+GK+RLG LV RKTCT LALT V++ D+A+F KV+EA+KTNFNER+E+
Sbjct: 190 KGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEE 237
Score = 31.9 bits (69), Expect = 0.87
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -1
Query: 117 LRKHWGGGVLGNKS 76
+R+HWGGG+LG+KS
Sbjct: 238 IRRHWGGGILGSKS 251
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 54.8 bits (126), Expect = 1e-07
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 412 NTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPA 245
N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQA 87
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 54.8 bits (126), Expect = 1e-07
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -3
Query: 412 NTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGSPA 245
N +R G N TK + + A +VV+A D +PIE++L LP LC VPY V+ A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQA 87
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 269
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 269
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -3
Query: 406 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 269
+R+G V + K + + + A DV P++++ LPA+C + G+PY
Sbjct: 67 LRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPY 112
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234
protein.
Length = 1228
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 CILQNLEKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 669
CIL N +KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 251 CILLN-DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 303
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p
protein.
Length = 1241
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 CILQNLEKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 669
CIL N +KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 258 CILLN-DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21
protein.
Length = 1241
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 CILQNLEKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 669
CIL N +KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 258 CILLN-DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 CILQNLEKALSCSLVQCLGKLVDRRGHFQTTLKYSLLAL-DADILGPSYKSGQVPS 669
CIL N +KA C+ +CL ++ +R+G QT + LL L + + L Y++ Q+P+
Sbjct: 258 CILLN-DKAFQCNAAECLAQITNRKG--QTKERKPLLQLFNEEPLRYIYQASQIPA 310
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.7 bits (71), Expect = 0.50
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 418 RPNTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIE 317
RP+ ++ T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AY069179-1|AAL39324.1| 546|Drosophila melanogaster GH22722p
protein.
Length = 546
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 437 FLGNLSFSSFPQPLFPGCFSLRPVFSKIL-KRPLAVVLSSVWVNWLIGGGTFRR 595
F+ +F+S P+ G ++ +FSK+L RP VW+ W+ G G R
Sbjct: 399 FIIGFAFTSIGYPI--GVTLIQTIFSKVLGPRP-----QGVWMGWMTGSGCLSR 445
>AE014296-1236|AAF50577.2| 546|Drosophila melanogaster CG8596-PA
protein.
Length = 546
Score = 28.7 bits (61), Expect = 8.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 437 FLGNLSFSSFPQPLFPGCFSLRPVFSKIL-KRPLAVVLSSVWVNWLIGGGTFRR 595
F+ +F+S P+ G ++ +FSK+L RP VW+ W+ G G R
Sbjct: 399 FIIGFAFTSIGYPI--GVTLIQTIFSKVLGPRP-----QGVWMGWMTGSGCLSR 445
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,483,133
Number of Sequences: 53049
Number of extensions: 602363
Number of successful extensions: 2442
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2442
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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