Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30793
(735 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 140 2e-32
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 1e-29
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 127 3e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 121 2e-26
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 112 1e-23
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 105 1e-21
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 102 1e-20
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 100 4e-20
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 99 1e-19
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 97 3e-19
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 88 2e-16
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 88 2e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 86 7e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 83 9e-15
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 78 3e-13
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 77 6e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 74 4e-12
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 66 1e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 55 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 50 8e-05
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 49 1e-04
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 47 6e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 46 0.001
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 45 0.002
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 42 0.021
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.027
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 39 0.15
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 38 0.19
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 38 0.34
UniRef50_UPI0000E24310 Cluster: PREDICTED: hypothetical protein;... 37 0.45
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 37 0.45
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 37 0.45
UniRef50_UPI00006CB684 Cluster: hypothetical protein TTHERM_0044... 36 1.0
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 1.0
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-... 35 1.8
UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protei... 35 2.4
UniRef50_Q58PU2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q84Z22 Cluster: Putative uncharacterized protein OSJNBa... 33 7.3
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 7.3
UniRef50_UPI0000EBDE04 Cluster: PREDICTED: hypothetical protein;... 33 9.6
UniRef50_Q4T4W6 Cluster: Chromosome undetermined SCAF9520, whole... 33 9.6
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.6
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.6
UniRef50_A1DGM2 Cluster: Putative uncharacterized protein; n=2; ... 33 9.6
UniRef50_A1D0C5 Cluster: Heat shock transcription factor; n=9; E... 33 9.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 140 bits (340), Expect = 2e-32
Identities = 65/94 (69%), Positives = 77/94 (81%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCI 143
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT KDS+SQRKTCYAQH+Q++ IR KM II R
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKR 177
Score = 134 bits (325), Expect = 2e-30
Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 GLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
G+S +VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVF
Sbjct: 8 GVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
Query: 181 EVSLADLQADTDAERSFRKFRLIADMC--KDVMCSATSTAWTSQPISS 318
EVSLADLQ + DAERSFRKF+L+A+ +DV+ + A T+ + S
Sbjct: 68 EVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRS 115
Score = 94.3 bits (224), Expect = 3e-18
Identities = 41/60 (68%), Positives = 53/60 (88%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LMELHG+
Sbjct: 178 EITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (318), Expect = 1e-29
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 4e-23
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 2e-19
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 127 bits (306), Expect = 3e-28
Identities = 58/95 (61%), Positives = 73/95 (76%)
Frame = +3
Query: 222 KVFPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 401
+ + +I++ VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 402 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIIT 506
CI FT K +KTCYAQ +Q+R IR+KM EI+T
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMT 568
Score = 105 bits (252), Expect = 1e-21
Identities = 50/70 (71%), Positives = 59/70 (84%)
Frame = +1
Query: 46 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 225
DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED--Q 474
Query: 226 SFRKFRLIAD 255
++RK RL A+
Sbjct: 475 AYRKIRLRAE 484
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/66 (53%), Positives = 52/66 (78%)
Frame = +2
Query: 515 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEAV 694
T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+
Sbjct: 572 TSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYS 631
Query: 695 EARGSR 712
E G++
Sbjct: 632 EDVGTK 637
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 121 bits (291), Expect = 2e-26
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +3
Query: 222 KVFPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 401
+VF +I++ V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 402 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRT 512
I FT K ++KT YA+ ++V+AIRKKM +I+T T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +1
Query: 43 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 210
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK-- 73
Query: 211 TDAERSFRKFRLIAD 255
D + FRK +L A+
Sbjct: 74 DDESQVFRKIKLRAE 88
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +2
Query: 560 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEA 691
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+ +
Sbjct: 205 TLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASS 248
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 112 bits (269), Expect = 1e-23
Identities = 53/98 (54%), Positives = 71/98 (72%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F +I++ VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I
Sbjct: 81 FRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAI 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLT 521
T + +KT YA +Q+RAIR+KM EII R + T
Sbjct: 141 AVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 91.5 bits (217), Expect = 2e-17
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +1
Query: 46 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 225
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED--H 79
Query: 226 SFRKFRLIADMCKDVMC 276
+FRK +L D + C
Sbjct: 80 AFRKIKLRVDEVQGKNC 96
Score = 72.9 bits (171), Expect = 7e-12
Identities = 31/61 (50%), Positives = 48/61 (78%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+ LHGE
Sbjct: 175 EASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGE 234
Query: 689 A 691
+
Sbjct: 235 S 235
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 105 bits (252), Expect = 1e-21
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 93 VNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQI 152
Query: 438 RKTCYAQHTQVRAIRKKMCEIITR 509
+KT YA+ Q++ IRK M +IT+
Sbjct: 153 KKTSYAKSAQIKKIRKIMNNLITK 176
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 201
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 102 bits (244), Expect = 1e-20
Identities = 48/95 (50%), Positives = 65/95 (68%)
Frame = +3
Query: 225 VFPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 404
+F + ++ VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F
Sbjct: 6 IFRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFV 65
Query: 405 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
I FT K Q+ YAQ T+++ +R ++ E++ R
Sbjct: 66 IAFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQR 99
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++ +++ELH E
Sbjct: 100 EVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELHSE 159
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 100 bits (239), Expect = 4e-20
Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Frame = +3
Query: 222 KVFPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 401
K + ++++ V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 402 CIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIITRTSLTL 524
+ FT K S S TCYA+ +QVRAIR+K+ IT + L
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKL 185
Score = 77.4 bits (182), Expect = 3e-13
Identities = 34/71 (47%), Positives = 51/71 (71%)
Frame = +1
Query: 43 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 222
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D +
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DNSND 81
Query: 223 RSFRKFRLIAD 255
+++RK +L+ D
Sbjct: 82 KAWRKVKLVID 92
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +2
Query: 527 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEAVEARG 706
+ E LI + K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+ E +G
Sbjct: 187 IAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELYSH--EKKG 244
Query: 707 SR 712
+
Sbjct: 245 EK 246
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 98.7 bits (235), Expect = 1e-19
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +1
Query: 43 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 222
VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D E
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND---E 78
Query: 223 RSFRKFRLIADMCKDVMC 276
+FRKF+LI + + C
Sbjct: 79 VAFRKFKLITEDVQGKRC 96
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 122 EVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 181
Score = 96.3 bits (229), Expect = 7e-19
Identities = 49/79 (62%), Positives = 60/79 (75%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND--- 74
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 75 EVAFRKFKLITEDVQGKNC 93
Score = 40.3 bits (90), Expect = 0.048
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 380
F + ++ VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 78 FRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT Q
Sbjct: 90 VEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQ 149
Query: 438 RKTCYAQHTQVRAIRKKMCEIITR 509
RKT YAQ +Q++ IRKK+ EI+ +
Sbjct: 150 RKTTYAQRSQIKDIRKKIVEIVLK 173
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +1
Query: 43 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 222
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D +
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD-Q 77
Query: 223 RSFRKFRLIADMCKDVMC 276
++RK +LI D + C
Sbjct: 78 MAWRKVKLIIDDVEGTRC 95
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/61 (32%), Positives = 41/61 (67%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ + KL E + +
Sbjct: 174 EVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFYDD 233
Query: 689 A 691
+
Sbjct: 234 S 234
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 87.8 bits (208), Expect = 2e-16
Identities = 35/96 (36%), Positives = 63/96 (65%)
Frame = +3
Query: 222 KVFPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 401
+ + +++ + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 402 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
+ FT + Q + CYA+ V+ +R ++ ++I R
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKR 177
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 46 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 225
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEE 82
Query: 226 SFRKFR 243
++RK R
Sbjct: 83 AYRKVR 88
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/54 (33%), Positives = 36/54 (66%)
Frame = +2
Query: 524 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHG 685
+++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+ HG
Sbjct: 183 QIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAHG 236
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 86.2 bits (204), Expect = 7e-16
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +2
Query: 542 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEA 691
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG++
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDS 50
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 82.6 bits (195), Expect = 9e-15
Identities = 36/70 (51%), Positives = 53/70 (75%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH-- 215
Query: 689 AVEARGSRRQ 718
A+ GS R+
Sbjct: 216 ALGLHGSHRK 225
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLS 434
++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+ TN +
Sbjct: 76 MRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRY 134
Query: 435 QRKTCYAQHTQVRAI 479
R+ AQ+ QV I
Sbjct: 135 ARQLVCAQYQQVHQI 149
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +1
Query: 58 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 237
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D + RK
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQND---KVVVRK 68
Query: 238 FRLIAD 255
F+LI +
Sbjct: 69 FKLITE 74
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G T +
Sbjct: 43 IKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYV 102
Query: 438 RKTCYAQHTQVRAIRKKMCEII 503
+KTCY +H+ + IRK M ++I
Sbjct: 103 KKTCYVKHSDEKKIRKIMFDVI 124
Score = 39.1 bits (87), Expect = 0.11
Identities = 14/45 (31%), Positives = 32/45 (71%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 643
+++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 127 ELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLC--NFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 401
F I N + ++ N C FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F
Sbjct: 75 FSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLF 134
Query: 402 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLTLN 527
I + K + KT Y +Q RA+R+++ +II + + ++
Sbjct: 135 LIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMD 176
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +2
Query: 473 SNQKENV*NHYTDVT-----NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 637
S+QK + TD+ N ++++ ++++ I + IE C I+P+ V IRK+KV
Sbjct: 154 SSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKV 213
Query: 638 LK 643
++
Sbjct: 214 VE 215
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/86 (40%), Positives = 53/86 (61%)
Frame = +3
Query: 249 RRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 428
R G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K +
Sbjct: 84 RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLA 143
Query: 429 LSQRKTCYAQHTQVRAIRKKMCEIIT 506
S + YA + R +R M + +T
Sbjct: 144 NSHKNHTYANSHKARQVRDVMIKALT 169
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +3
Query: 243 INRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 422
+ + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++
Sbjct: 86 LQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDR 145
Query: 423 DSLSQRKTCYAQHTQVRAIRKKMCEII 503
+RK C+ + +R +R + E +
Sbjct: 146 FRFQRRKNCHVKGRVIRMMRAGIYETL 172
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +1
Query: 46 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 225
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL +
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLN 79
Query: 226 SFRKFRLIADMCKDVMC 276
KF L + D C
Sbjct: 80 GNTKFYLQTQLVSDGKC 96
Score = 34.7 bits (76), Expect = 2.4
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +2
Query: 536 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 682
+V KL + + +A I RDV IR+VKV+KRPR + L +H
Sbjct: 184 LVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/102 (33%), Positives = 58/102 (56%)
Frame = +3
Query: 234 QIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 413
+ QI+R V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 76 KFQIHR--VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 414 TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRTSLTLNSGRW 539
T + +K+ A+RKKM E + + + L+SG++
Sbjct: 134 TTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQF 166
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 49.6 bits (113), Expect = 8e-05
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +3
Query: 291 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 470
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQM 134
Query: 471 RAIRKKMCEIITR 509
+AIR+ M +I+ +
Sbjct: 135 QAIREMMVDIVKK 147
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = -1
Query: 216 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 37
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 36 LLNTFF 19
LL++ F
Sbjct: 136 LLSSLF 141
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +3
Query: 240 QINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTN 419
+INR VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + +
Sbjct: 73 KINR--VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPD 130
Query: 420 KDSLSQRKT 446
+ S KT
Sbjct: 131 RRIKSSIKT 139
Score = 33.9 bits (74), Expect = 4.2
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 533 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM-ELHGEAVEARGS 709
E V +I D +++ K IYP+R + IRK +VL P +I +L+ E E +E +
Sbjct: 160 EYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELVREEEPEEIEVEPA 219
Query: 710 RRQ 718
+ +
Sbjct: 220 QEE 222
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/28 (60%), Positives = 26/28 (92%)
Frame = +2
Query: 608 RDVCIRKVKVLKRPRFEISKLMELHGEA 691
R +C++KVK+LK+P+FE+ KLMELHG++
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDS 90
Score = 41.5 bits (93), Expect = 0.021
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTT 120
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT------- 118
Query: 438 RKTCYAQHTQVRAIRKKMCEII 503
T A+ +Q RAIRK+M ++I
Sbjct: 119 --TRRAKTSQQRAIRKEMFKVI 138
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 41.5 bits (93), Expect = 0.021
Identities = 31/90 (34%), Positives = 46/90 (51%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT + +
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRR 131
Query: 438 RKTCYAQHTQVRAIRKKMCEIITRTSLTLN 527
KT +Q RAIR M +I+ + +LN
Sbjct: 132 CKT-----SQKRAIRAIMRQIVVEKASSLN 156
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.1 bits (92), Expect = 0.027
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
+ G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 72 IGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK----- 126
Query: 438 RKTCYAQHTQVRAIRKKMCEIITRTSLTL 524
A+ +Q+ +IR+ M ++ + L
Sbjct: 127 ----RARTSQIESIRQIMINVVNKRGAEL 151
Score = 38.3 bits (85), Expect = 0.19
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 43 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 222
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWTKQ 61
Query: 223 RSFRKFRL 246
FR+
Sbjct: 62 NIKMIFRI 69
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 38.7 bits (86), Expect = 0.15
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V+G F G +L D +R + ++ + + +V T DGY LRV + FT
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT------- 122
Query: 438 RKTCYAQHTQVRAIRKKMCEII 503
R+ C + +Q AIRK M EI+
Sbjct: 123 RQRC--KTSQKSAIRKVMQEIV 142
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 258 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 437
V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV + T +
Sbjct: 79 VSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDH 138
Query: 438 RKT 446
KT
Sbjct: 139 HKT 141
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 37.5 bits (83), Expect = 0.34
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 440
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV +
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLAL--------- 129
Query: 441 KTCYAQH-TQVRAIRKKMCEIITRTS 515
T Y H Q IRK M +++ +T+
Sbjct: 130 -TAYRVHREQATTIRKIMEDVVKKTA 154
>UniRef50_UPI0000E24310 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 389
Score = 37.1 bits (82), Expect = 0.45
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Frame = -2
Query: 728 PFRLVSGFPLPPPLRRE---VPSTSRSR--NGASSTLS----PFGCKHRAEGRCHGRPSR 576
PF S FP PPLRR +P ++R+R GA S LS P HR G C GR +
Sbjct: 183 PFVAPSPFPAQPPLRRRQQGLPGSARARAQAGALSPLSGLAHPSAPGHRPPGPCRGRKAA 242
Query: 575 CP 570
P
Sbjct: 243 AP 244
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 37.1 bits (82), Expect = 0.45
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 297 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 443
+LT D LR +V++ + +EA+I V TTD Y +RV + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 37.1 bits (82), Expect = 0.45
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +3
Query: 297 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 476
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 477 IRKKMCEIITRTS 515
IR+ M +++ T+
Sbjct: 134 IRRTMIDLVRETA 146
>UniRef50_UPI00006CB684 Cluster: hypothetical protein
TTHERM_00446420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446420 - Tetrahymena
thermophila SB210
Length = 1054
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +2
Query: 428 LEPTQDVLRPAHSGQSNQKENV*NHYTDVTNSELREVVNKLIPDSIAKDIEKACHGI 598
L+P Q V + GQ+NQ +N N Y ++ N+ RE V +L PDS+ + +K H I
Sbjct: 471 LQPNQAVNKTFSEGQTNQNQNQEN-YQNINNT--REDVGQL-PDSLGQPFQKQFHSI 523
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.9 bits (79), Expect = 1.0
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = +3
Query: 141 NENCFGRIEGKSFRSFPG*STS*H*RGKVFPQIQINRRYVQGRNVLCNFHGMDLTTDKLR 320
+E+ GRI + + F G T H V + +++ G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFRVSETV--GQDALTTFVGHHHQTNHIR 104
Query: 321 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 422
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
- Drosophila melanogaster (Fruit fly)
Length = 332
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/87 (22%), Positives = 43/87 (49%)
Frame = +2
Query: 452 RPAHSGQSNQKENV*NHYTDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 631
+P S S + N+ + + T+ + VN++ S+ + +A +G+ +R+ ++
Sbjct: 83 KPGSSSSSKETRNI-KQFANETDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEI 141
Query: 632 KVLKRPRFEISKLMELHGEAVEARGSR 712
V KRP+ EI +L++ + G R
Sbjct: 142 TVQKRPKNEIDELLKQKQKEQRLAGKR 168
>UniRef50_UPI00015B58EF Cluster: PREDICTED: similar to Chm protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Chm
protein - Nasonia vitripennis
Length = 593
Score = 34.7 bits (76), Expect = 2.4
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +3
Query: 318 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC- 494
R +++ + +E D DGY + F + + N +L+ Y A K C
Sbjct: 218 RMLMQLLTSCLEQGADSPEFDGYRDKTF-VEYLNTKNLTPIVKHYVMQAIAMATDKTSCR 276
Query: 495 EIITRTSLTLNS-GRW*TS*FLTPLPRTSRRPAMASTLCAMF 617
+ + RT LNS GR+ + FL P+ + P LCA+F
Sbjct: 277 DGVNRTKHFLNSLGRYGNTPFLWPMYGSGELPQCFCRLCAVF 318
>UniRef50_Q58PU2 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 479
Score = 33.1 bits (72), Expect = 7.3
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -3
Query: 604 RVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVRVMISHIFFLIALT*VCWA*HVLRWLKE 425
RV GL V VR Q+V P+ R R + + F++A V W H L WL +
Sbjct: 59 RVTLYVGLALVWLLKVRPQMVRRWPQIRQRLPRTELLAVLFILATEYVAWLFHHLEWLTQ 118
>UniRef50_Q84Z22 Cluster: Putative uncharacterized protein
OSJNBa0036M16.123; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0036M16.123 - Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 33.1 bits (72), Expect = 7.3
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 698 PPPLRREVPSTSRSRNGASST-LSPFGCKHRAEGRCHGRPSRC 573
PPPLR P+ R G+ P GC HR GRPS C
Sbjct: 235 PPPLR---PAAKRRPAGSGRAGADPDGCHHRRPASSPGRPSTC 274
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 285 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 443
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_UPI0000EBDE04 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 359
Score = 32.7 bits (71), Expect = 9.6
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -2
Query: 698 PPPLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCH-GRPSRCPWQWSQESTCSP 537
PP LRR VP GA+ GC A G+C G PS P C P
Sbjct: 160 PPRLRRRVPGARGLGAGAAPRSGAGGCGAAAPGKCSLGAPSSRPLAPRGGKVCPP 214
>UniRef50_Q4T4W6 Cluster: Chromosome undetermined SCAF9520, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF9520, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 517
Score = 32.7 bits (71), Expect = 9.6
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2
Query: 347 ESLPFFNHPPELIGCEVHAVEVAEHITSLHISAINLNLRKDLSASVSACRSARETSKTL 171
E PFF+ PEL V A++V I L + +N L KD + AC + S+TL
Sbjct: 67 EGNPFFSEDPELDNLMVKAIQVL-RIHLLELEKVN-ELCKDFCSRYIACLKTKMNSETL 123
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 295 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 420
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 9.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 524 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 676
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_A1DGM2 Cluster: Putative uncharacterized protein; n=2;
Trichocomaceae|Rep: Putative uncharacterized protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 387
Score = 32.7 bits (71), Expect = 9.6
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -2
Query: 734 LRPFRLVSGFPLPPPLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQ 555
LR R+ G +PPPLRR + AS+T S G +HR + P +Q
Sbjct: 67 LRSRRVEGGKVVPPPLRRGGIGAPNKASNASTTYSRGGARHRMRNARQSDSAAEPSDLAQ 126
Query: 554 ESTCS 540
++ S
Sbjct: 127 DTDVS 131
>UniRef50_A1D0C5 Cluster: Heat shock transcription factor; n=9;
Eurotiomycetidae|Rep: Heat shock transcription factor -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 799
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 692 PLRREVPSTSRSRNGASSTLSPFGCKH-RAEGRCHGR 585
PL + P T+ +NG ++TLSP G + R++ R H R
Sbjct: 430 PLLLKAPPTTERQNGRATTLSPAGSTYNRSQSRSHSR 466
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,910,653
Number of Sequences: 1657284
Number of extensions: 15952496
Number of successful extensions: 50602
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 48265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50578
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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