Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30793
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   138   1e-34
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.79 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        24   4.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.6  
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           23   7.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.4  
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   9.8  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  138 bits (335), Expect = 1e-34
 Identities = 64/94 (68%), Positives = 76/94 (80%)
 Frame = +3

Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
           F + ++    V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVFCI
Sbjct: 84  FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCI 143

Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
           GFT KDS+SQRKTCYAQH+Q++ IR KM  II R
Sbjct: 144 GFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKR 177



 Score =  132 bits (319), Expect = 1e-32
 Identities = 66/108 (61%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   GLSXXXXXXXXXXIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVF 180
           G+S          +VDPFTRKDWYDVKAP+MF  RQ G TLVNRTQGTKIAS+GLKGRVF
Sbjct: 8   GVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVF 67

Query: 181 EVSLADLQADTDAERSFRKFRLIADMC--KDVMCSATSTAWTSQPISS 318
           EVSLADLQ + DAERSFRKF+L+A+    +DV+ +    A T+  + S
Sbjct: 68  EVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRS 115



 Score = 94.3 bits (224), Expect = 4e-21
 Identities = 41/60 (68%), Positives = 53/60 (88%)
 Frame = +2

Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
           ++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKVLK+PRF++S LMELHG+
Sbjct: 178 EITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 237


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 598 LPSARCLHPKGESVEEAPFRDLEVDGT 678
           +P   C H  G ++E+A    LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 237 IQINRRY-VQGRNVLCNFHGMDLTTDKLRWMVKKWQT 344
           +Q N  Y +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 123 LQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 628 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 542
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 237 IQINRRY-VQGRNVLCNFHGMDLTTDKLRWMVKKWQT 344
           +Q N  Y +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 198 LQYNFIYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -2

Query: 653 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 537
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 271 LRPCTYRRLI*ICGKTFPRQ 212
           +RP TY R+  ICG+ + R+
Sbjct: 77  VRPDTYFRINCICGEEYDRE 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,136
Number of Sequences: 2352
Number of extensions: 17048
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)