Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30793
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 132 2e-30
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 132 2e-30
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 132 2e-30
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 132 2e-30
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 132 2e-30
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 51 4e-06
X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein. 30 7.5
BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein. 30 7.5
AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein. 30 7.5
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 132 bits (318), Expect = 2e-30
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +3
Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
F + ++ VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+
Sbjct: 81 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 140
Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
GFT K + RKT YAQH QVR IRKKM EI+TR
Sbjct: 141 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR 174
Score = 110 bits (264), Expect = 6e-24
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 40 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 219
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 220 ERSFRKFRLIADMCKDVMC 276
E +FRKF+LI + + C
Sbjct: 78 EVAFRKFKLITEDVQGKNC 96
Score = 97.9 bits (233), Expect = 3e-20
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 175 EVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGE 234
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 51.2 bits (117), Expect = 4e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +2
Query: 602 PLRDVCIRKVKVLKRPRFEISKLMELHGE 688
PL DV +RKVK+LK+P+FE+ KLMELHGE
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELHGE 29
>X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein.
Length = 816
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 695 PPLRREVPSTSRSRNGASSTLSPFGCKHRAEG 600
PP +RE+P+TSRS + TL HR EG
Sbjct: 13 PPKKREIPATSRSSEEKAPTLP--SDNHRVEG 42
>BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 695 PPLRREVPSTSRSRNGASSTLSPFGCKHRAEG 600
PP +RE+P+TSRS + TL HR EG
Sbjct: 13 PPKKREIPATSRSSEEKAPTLP--SDNHRVEG 42
>AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 695 PPLRREVPSTSRSRNGASSTLSPFGCKHRAEG 600
PP +RE+P+TSRS + TL HR EG
Sbjct: 13 PPKKREIPATSRSSEEKAPTLP--SDNHRVEG 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,610,787
Number of Sequences: 237096
Number of extensions: 2525688
Number of successful extensions: 10679
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10671
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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