Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30793
         (735 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...   111   4e-25
Z83225-2|CAB05722.1|  732|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81097-19|CAB03177.1|  732|Caenorhabditis elegans Hypothetical p...    29   3.4  
L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score =  111 bits (268), Expect = 4e-25
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = +1

Query: 43  VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 222
           VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQGTKIASEGLKGRVFEVSL DL    ++E
Sbjct: 20  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76

Query: 223 RSFRKFRLIAD 255
             FRKF+LIA+
Sbjct: 77  ADFRKFKLIAE 87



 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 48/94 (51%), Positives = 61/94 (64%)
 Frame = +3

Query: 228 FPQIQINRRYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 407
           F + ++    VQG+NVL NFH M +T DKL  +VKKW TLIEAN  VKTTDGY LRVF I
Sbjct: 79  FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 138

Query: 408 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 509
            FT K     +KT Y + +++R IR +M   I +
Sbjct: 139 AFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEK 172



 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 35/62 (56%), Positives = 52/62 (83%)
 Frame = +2

Query: 509 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 688
           +VT  +L+EVV+KLIPDSI KDIEK C  +YPL++V IRKVK++KRP+ ++ +L +LHG+
Sbjct: 173 EVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD 232

Query: 689 AV 694
           ++
Sbjct: 233 SI 234


>Z83225-2|CAB05722.1|  732|Caenorhabditis elegans Hypothetical
           protein F42H11.2 protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = -2

Query: 512 RPCNDFTHFLSDCSDLSVLGVARLALAQGVLIGETNAEDT*NVSIGCLHINVGFDESLPF 333
           RP  +  H+L+  S  + +  AR  L +G  +   + +    +   C H NV   + L  
Sbjct: 26  RPKKETLHYLAASSSTTSVDAARTLLERGANVNAIDRDGATPLHYACTHDNVAMAQLLLT 85

Query: 332 FNHPP 318
           F   P
Sbjct: 86  FGADP 90


>Z81097-19|CAB03177.1|  732|Caenorhabditis elegans Hypothetical
           protein F42H11.2 protein.
          Length = 732

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/65 (24%), Positives = 27/65 (41%)
 Frame = -2

Query: 512 RPCNDFTHFLSDCSDLSVLGVARLALAQGVLIGETNAEDT*NVSIGCLHINVGFDESLPF 333
           RP  +  H+L+  S  + +  AR  L +G  +   + +    +   C H NV   + L  
Sbjct: 26  RPKKETLHYLAASSSTTSVDAARTLLERGANVNAIDRDGATPLHYACTHDNVAMAQLLLT 85

Query: 332 FNHPP 318
           F   P
Sbjct: 86  FGADP 90


>L25599-3|ABN43087.1|  570|Caenorhabditis elegans Hypothetical
           protein F54H12.8 protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 671 STSRSRNG--ASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 531
           S+S S N   ASST S     +    R   +P+  PWQ  Q S  +PPP
Sbjct: 94  SSSYSGNSLTASSTTSDPSIPNPTRKRITRQPNYPPWQPHQPSNPNPPP 142


>AF100659-8|AAC68966.1|  688|Caenorhabditis elegans Hypothetical
           protein F58E2.3 protein.
          Length = 688

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 293 AVEVAEHITSLHISAINLNLRKD 225
           A+ +  HI+S H+  INLN RK+
Sbjct: 147 ALSIFRHISSNHLEIINLNFRKE 169


>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 722 RLVSGFPLPPPLRREVPSTSRS 657
           RL    PLPPPL +E P T+ S
Sbjct: 871 RLNKTLPLPPPLPKEKPKTASS 892


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 722 RLVSGFPLPPPLRREVPSTSRS 657
           RL    PLPPPL +E P T+ S
Sbjct: 871 RLNKTLPLPPPLPKEKPKTASS 892


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,207,462
Number of Sequences: 27780
Number of extensions: 381571
Number of successful extensions: 1197
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)