Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30791
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 130 3e-29
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 115 8e-25
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 104 2e-21
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 69 7e-11
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 68 2e-10
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 67 2e-10
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 64 3e-09
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 59 6e-08
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 45 0.001
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 42 0.009
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 41 0.022
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 41 0.022
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 40 0.050
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 39 0.088
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 39 0.088
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.15
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 38 0.15
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 37 0.27
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 37 0.27
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 36 0.47
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 36 0.82
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 35 1.1
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 35 1.4
UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;... 34 2.5
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 34 2.5
UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus... 33 4.4
UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 33 4.4
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 32 7.6
UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; ... 32 7.6
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 130 bits (313), Expect = 3e-29
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +1
Query: 25 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 205 KVKADRDEASPYAAMLA 255
KVKADRDE+SPYAAMLA
Sbjct: 61 KVKADRDESSPYAAMLA 77
Score = 72.5 bits (170), Expect = 6e-12
Identities = 37/65 (56%), Positives = 41/65 (63%)
Frame = +3
Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
+ AQDVA++CK LGITALHIKLRA AQ MKIGRIEDVTP+
Sbjct: 76 LAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPI 135
Query: 429 PSDST 443
PSDST
Sbjct: 136 PSDST 140
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 115 bits (276), Expect = 8e-25
Identities = 55/70 (78%), Positives = 58/70 (82%)
Frame = +1
Query: 25 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 205 KVKADRDEAS 234
KVKADRDE+S
Sbjct: 61 KVKADRDESS 70
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 104 bits (249), Expect = 2e-21
Identities = 49/68 (72%), Positives = 57/68 (83%)
Frame = +1
Query: 52 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 231
K+EV+ GP G+ V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71
Query: 232 SPYAAMLA 255
SPYAAM+A
Sbjct: 72 SPYAAMMA 79
Score = 35.5 bits (78), Expect = 0.82
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 249 VGAQDVAEKCKTLGITALHIKLRA 320
+ AQDV +CK GI ALH+K+RA
Sbjct: 78 MAAQDVVARCKECGINALHVKMRA 101
Score = 34.7 bits (76), Expect = 1.4
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 395 EDWPH*RCHPRTIRLDP*EGWP 460
EDWPH CHP RL P +G+P
Sbjct: 127 EDWPHRGCHPDPDRLHPPQGFP 148
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 68.9 bits (161), Expect = 7e-11
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +1
Query: 106 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
+G+ HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM A
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQA 58
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/60 (41%), Positives = 30/60 (50%)
Frame = +3
Query: 264 VAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPSDST 443
+AE K GI +HIK+RA AQ ++IGRIEDVTPVP D T
Sbjct: 62 LAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = +1
Query: 151 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLA
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLA 124
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/65 (50%), Positives = 38/65 (58%)
Frame = +3
Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
+ AQDVA +CK LGITALHIK+RA Q +KIGRIEDVTP
Sbjct: 123 LAAQDVAARCKELGITALHIKMRAKGGNKTKSPGPGGQSALRALSRSGIKIGRIEDVTPT 182
Query: 429 PSDST 443
P+DST
Sbjct: 183 PTDST 187
Score = 48.8 bits (111), Expect = 8e-05
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 34 RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 150
R V+ V T +GPQ GE VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 67.3 bits (157), Expect = 2e-10
Identities = 28/59 (47%), Positives = 44/59 (74%)
Frame = +1
Query: 79 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM A
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKA 124
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 255 AQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPS 434
A V E + G T HI++RA AQ +IGRI+DVTP+P
Sbjct: 125 ANKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPH 184
Query: 435 DST 443
D+T
Sbjct: 185 DTT 187
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 106 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM A
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQA 95
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 255 AQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPVPS 434
A VA + K GIT ++I++RA AQ +++ RIEDVTP+P+
Sbjct: 96 AYKVAAEAKEKGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTPIPT 155
Query: 435 DST 443
D+T
Sbjct: 156 DTT 158
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 59.3 bits (137), Expect = 6e-08
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +1
Query: 103 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAHRM*QRNAK 282
+FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA + K
Sbjct: 11 LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70
Query: 283 LL 288
+L
Sbjct: 71 VL 72
Score = 50.4 bits (115), Expect = 3e-05
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +3
Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
+ Q V+ CK LGI ALHIK+RA A KIGRIED TP
Sbjct: 60 LATQKVSNVCKVLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTPT 119
Query: 429 PSDST 443
P++ T
Sbjct: 120 PTNGT 124
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 67 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVK 213
++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK +
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ 54
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 41.9 bits (94), Expect = 0.009
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAHRM*QRNA 279
G+AH+ ASFN+T + +TD G +GG K R +++P+AA +A + R A
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAA 79
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 40.7 bits (91), Expect = 0.022
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
G+AHI A+FN+T V +TD+ G G + K R +++P+AA +A
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMA 64
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 40.7 bits (91), Expect = 0.022
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
G+AHI ASFN+T V +TD G +GG + R +++P+AA +A
Sbjct: 20 GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVA 67
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 39.5 bits (88), Expect = 0.050
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
GVAHI ++FN+T V +TD +G G + K R +++P+AA LA
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLA 69
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 38.7 bits (86), Expect = 0.088
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 190 VTGGMKVKADRDEASPYAAML 252
V GGMK+KAD DE+SPYAAML
Sbjct: 211 VGGGMKIKADCDESSPYAAML 231
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 38.7 bits (86), Expect = 0.088
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 255 AQDVAEKCKTLGITALHIKLRA 320
AQDV ++CK LGITALHIKL A
Sbjct: 19 AQDVVQRCKELGITALHIKLLA 40
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 37.9 bits (84), Expect = 0.15
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 175 ETIARVTGGMKVKADRDEASPYAAMLA 255
ET+ R TGGMK KAD +E+SP AAM A
Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPA 55
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 37.9 bits (84), Expect = 0.15
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
GVAH+ ++FN+T + ++D+ G G M K R +++PYAA LA
Sbjct: 20 GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLA 67
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 37.1 bits (82), Expect = 0.27
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1
Query: 175 ETIARVTGGMKVKADRDEASPYAAMLA 255
ET+ R TGGMK K D +E+SP AAM A
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPA 76
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 255 AQDVAEKCKTLGITALHIKLRA 320
AQDV+++CK L IT LH+KL A
Sbjct: 77 AQDVSQECKELDITVLHVKLHA 98
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 37.1 bits (82), Expect = 0.27
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
G+AHI ASFN+T V ++D SG + +G + + R + +P+AA A
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQA 79
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 36.3 bits (80), Expect = 0.47
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
G+AHI ++FN+T V +TD G G + + R +++P+AA +A
Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMA 68
>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1639 - Pyrococcus horikoshii
Length = 102
Score = 35.5 bits (78), Expect = 0.82
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 279 CISLLHPVRQHSSVG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 136
C P +H +G R I VS + H T+ + F G ISN+N VI
Sbjct: 53 CFFCCSPSSKHCCIGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 35.1 bits (77), Expect = 1.1
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
GV H+ ASFN+T V VTD+ GR G + R +P+AA A
Sbjct: 28 GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTA 75
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
GVAHI + N+T + +TDL G +G + K R + S YAA A
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAA 199
>UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;
Plasmodium knowlesi|Rep: 205 kDa Pk1(B+)1+ SICAvar
antigen - Plasmodium knowlesi
Length = 1759
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 293 NGLAHKAPCYWWKQNKDPWSWCSVCTSGS 379
NG H PC+W K +K W C + TSGS
Sbjct: 223 NGKEHCVPCHWDKDDK--WKDCKITTSGS 249
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 33.9 bits (74), Expect = 2.5
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 255
GV H+ SFN+T V VTD+ GR G K R + +AA +A
Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIA 75
>UniRef50_Q7VCT6 Cluster: Predicted protein; n=1; Prochlorococcus
marinus|Rep: Predicted protein - Prochlorococcus marinus
Length = 58
Score = 33.1 bits (72), Expect = 4.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 365 CTSGSCSFKYEDWPH*RCHPRTIRLD 442
C++ SCSF Y+DW H R H + D
Sbjct: 4 CSNRSCSFPYDDWHHCRIHRSKVTND 29
>UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma
capricolum|Rep: 30S ribosomal protein - Mycoplasma
capricolum
Length = 80
Score = 33.1 bits (72), Expect = 4.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAHR 261
G+AHI ++FN+T V V+D G G + K + +++PYA + R
Sbjct: 11 GIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSK-KSTPYATPINFR 60
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 32.3 bits (70), Expect = 7.6
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 109 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAML 252
G+A++ A+FN+T V TDL G I TGG +++ YAA +
Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQV 84
>UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2;
n=2; Saccharomyces cerevisiae|Rep: Good for full DBP5
activity protein 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 566
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 85 HLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAH 258
H G + H+F F D V+ +SG + + +V G +KV +RD P +++
Sbjct: 461 HNAGNDAYYTLHLFMKFCD--VNFRKISGMDDVLKVMGQVKVWGERDVREPKVVPMSY 516
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,706,538
Number of Sequences: 1657284
Number of extensions: 10298997
Number of successful extensions: 24275
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 23240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24265
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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