Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30791
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           26   0.25 
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      24   1.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.4  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 251 WRTGCSREMQNSWHNGLAHKAPCYWWKQN 337
           WR        N WHN   + +  +W K N
Sbjct: 364 WRNNQPSTSNNRWHNNNGNNSNNHWRKNN 392


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 82  QHLVGETVFGVAHIFASFNDTFVHVTDLSGRETI 183
           +H+VG  V  V  ++ SFN T  +V D   RE I
Sbjct: 21  EHMVGTIVVVVRGVWVSFNQTAQNV-DTFVREQI 53


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 140 SLNEAKMCATPNTVSPTK 87
           ++NE + C+TP   SPTK
Sbjct: 427 NVNENQDCSTPTENSPTK 444


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 301 KAVMPRVLHFSATSCAPT 248
           + V PRV     TSC PT
Sbjct: 343 RKVSPRVNTIKHTSCIPT 360


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 301 KAVMPRVLHFSATSCAPT 248
           + V PRV     TSC PT
Sbjct: 343 RKVSPRVNTIKHTSCIPT 360


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 146 NVSLNEAKMCATPNTVS 96
           NVSL++    +TPN +S
Sbjct: 454 NVSLSQVPALSTPNLLS 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,490
Number of Sequences: 336
Number of extensions: 2590
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)