Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30791
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...   149   2e-36
M21045-2|AAA28853.1|  151|Drosophila melanogaster protein ( D.me...   139   2e-33
M21045-1|AAA28852.1|  151|Drosophila melanogaster protein ( D.me...   139   2e-33
AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p pro...   139   2e-33
AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA...   139   2e-33
AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB...   139   2e-33
AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA...   139   2e-33
AY060361-1|AAL25400.1|  667|Drosophila melanogaster LD04789p pro...    29   4.1  

>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score =  149 bits (361), Expect = 2e-36
 Identities = 79/107 (73%), Positives = 83/107 (77%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLAHRM*QRNAKLLA*RPCT*SSVLLVETKQRP 345
           KVKADRDEASPYAAM   RM  R+A+  A  PC  S V    T+ RP
Sbjct: 61  KVKADRDEASPYAAMSPLRMWLRSARHWALLPCILSCVPPAATRPRP 107


>M21045-2|AAA28853.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>M21045-1|AAA28852.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p
           protein.
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA
           protein.
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB,
           isoform B protein.
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA,
           isoform A protein.
          Length = 151

 Score =  139 bits (337), Expect = 2e-33
 Identities = 69/77 (89%), Positives = 70/77 (90%)
 Frame = +1

Query: 25  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 204
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 205 KVKADRDEASPYAAMLA 255
           KVKADRDEASPYAAMLA
Sbjct: 61  KVKADRDEASPYAAMLA 77



 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 42/65 (64%)
 Frame = +3

Query: 249 VGAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTPV 428
           + AQDVAEKCKTLGITALHIKLRA            AQ          MKIGRIEDVTP+
Sbjct: 76  LAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPI 135

Query: 429 PSDST 443
           PSDST
Sbjct: 136 PSDST 140


>AY060361-1|AAL25400.1|  667|Drosophila melanogaster LD04789p
           protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 206 R*RLTVMKRHPTLLCWRTGCSREMQNSWHNGLAHKAPCYWWKQNK 340
           R R +V  RHP    W T  SR  QNS  +G   +A   W   +K
Sbjct: 531 RGRKSVSHRHPYSFRWETKKSRRSQNS-QSGACARAASMWTTLSK 574


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,981,288
Number of Sequences: 53049
Number of extensions: 511707
Number of successful extensions: 1331
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)