Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30788
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Z3 Cluster: Double-stranded RNA-binding zinc finger... 142 5e-33
UniRef50_Q29KR4 Cluster: GA14322-PA; n=1; Drosophila pseudoobscu... 37 0.53
UniRef50_UPI0000E7FE8A Cluster: PREDICTED: similar to zinc finge... 36 0.92
UniRef50_Q0JLP8 Cluster: Os01g0583200 protein; n=3; Oryza sativa... 36 0.92
UniRef50_A7P655 Cluster: Chromosome chr4 scaffold_6, whole genom... 36 1.2
UniRef50_A5C9S0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A2Z1C4 Cluster: Putative uncharacterized protein; n=3; ... 36 1.2
UniRef50_Q1HQ09 Cluster: WW domain binding protein 4; n=1; Bomby... 35 1.6
UniRef50_Q1VUD1 Cluster: ATPase involved in DNA repair; n=3; Bac... 35 2.1
UniRef50_Q584Z4 Cluster: Zinc finger protein, conserved; n=3; Tr... 34 2.8
UniRef50_Q207T2 Cluster: RNA-binding protein; n=1; Gymnadenia co... 34 3.7
UniRef50_O64571 Cluster: Putative RNA-binding protein; n=3; Arab... 34 3.7
UniRef50_A7QSC5 Cluster: Chromosome chr3 scaffold_158, whole gen... 34 3.7
UniRef50_A7QGK8 Cluster: Chromosome undetermined scaffold_92, wh... 34 3.7
UniRef50_Q9GYG3 Cluster: Abnormal growth rate protein 1; n=2; Ca... 34 3.7
UniRef50_UPI00004D242D Cluster: UPI00004D242D related cluster; n... 33 4.9
UniRef50_Q4RUC4 Cluster: Chromosome 1 SCAF14995, whole genome sh... 33 4.9
UniRef50_A5WV30 Cluster: Novel protein; n=9; Euteleostomi|Rep: N... 33 4.9
UniRef50_A7PFQ1 Cluster: Chromosome chr11 scaffold_14, whole gen... 33 4.9
UniRef50_A7PE31 Cluster: Chromosome chr11 scaffold_13, whole gen... 33 6.5
UniRef50_Q30LC9 Cluster: Gp17; n=2; Listeria phage A511|Rep: Gp1... 33 6.5
UniRef50_Q5BW97 Cluster: SJCHGC08015 protein; n=1; Schistosoma j... 33 6.5
UniRef50_A2YT98 Cluster: Putative uncharacterized protein; n=3; ... 33 8.6
>UniRef50_Q2F5Z3 Cluster: Double-stranded RNA-binding zinc finger
protein JAZ; n=1; Bombyx mori|Rep: Double-stranded
RNA-binding zinc finger protein JAZ - Bombyx mori (Silk
moth)
Length = 430
Score = 142 bits (345), Expect = 5e-33
Identities = 67/78 (85%), Positives = 67/78 (85%)
Frame = +1
Query: 1 MEGRLEQLIRREKKNLKPIXXXXXXXXXXXAKPISPELYCEICKTSMTCSEQMTMHLNGK 180
MEGRLEQLIRREKKNLKPI AKPISPELYCEICKTSMTCSEQMTMHLNGK
Sbjct: 233 MEGRLEQLIRREKKNLKPIEEIQENEDEKEAKPISPELYCEICKTSMTCSEQMTMHLNGK 292
Query: 181 RHLTKEKQHILKMMKCGS 234
RHLTKEKQHILKMMKCGS
Sbjct: 293 RHLTKEKQHILKMMKCGS 310
Score = 127 bits (307), Expect = 2e-28
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +3
Query: 243 KKTEAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTA 422
KK +APVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTA
Sbjct: 314 KKQKAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTA 373
Query: 423 EVSKT 437
EVSKT
Sbjct: 374 EVSKT 378
Score = 60.1 bits (139), Expect = 5e-08
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 523 EGEDDYDWGNGSGNWEDAPGEEL 591
EGEDDYDWGNGSGNWEDAPGEEL
Sbjct: 408 EGEDDYDWGNGSGNWEDAPGEEL 430
>UniRef50_Q29KR4 Cluster: GA14322-PA; n=1; Drosophila
pseudoobscura|Rep: GA14322-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 653
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHIL 213
L+CE+C S+T QM MH+ G RH ++H+L
Sbjct: 540 LHCELCDVSITSESQMAMHMAGARH----RRHVL 569
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 109 ELYCEICKTSMTCSEQMTMHLNGKRHL 189
+LYCE+C +T + H +G+RHL
Sbjct: 485 DLYCELCDLKLTSNVHAYQHFHGRRHL 511
>UniRef50_UPI0000E7FE8A Cluster: PREDICTED: similar to zinc finger
protein; n=2; Gallus gallus|Rep: PREDICTED: similar to
zinc finger protein - Gallus gallus
Length = 758
Score = 35.9 bits (79), Expect = 0.92
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 91 AKPISPE--LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGS 234
AKP S + YCE+CK S + H G +H KE+ LK + C S
Sbjct: 154 AKPESEKKIYYCEVCKVPCMSSISLQSHYRGMKHRKKEEALRLKTVYCPS 203
>UniRef50_Q0JLP8 Cluster: Os01g0583200 protein; n=3; Oryza
sativa|Rep: Os01g0583200 protein - Oryza sativa subsp.
japonica (Rice)
Length = 322
Score = 35.9 bits (79), Expect = 0.92
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
P +C +CKT+ T + + H +GK+H K K +
Sbjct: 110 PPWFCSLCKTTTTSKQTLLSHADGKKHRAKAKAY 143
>UniRef50_A7P655 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 387
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 109 ELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGS 234
+ +C+ CK T + M H NGK+H+ K K++ +M S
Sbjct: 209 KFWCQTCKIGTTSEDLMKKHQNGKKHMAKLKKNSGTLMAISS 250
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 94 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLT 192
K + + +CE CK T + M H NGK+H+T
Sbjct: 297 KQTNLKFWCETCKIGTTSEDLMKEHQNGKKHMT 329
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 109 ELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGS 234
+ +C IC+ S M MH NGK+H+ K ++ +M S
Sbjct: 118 KFWCPICEISTNDQALMEMHWNGKKHMAKLRKKSGTLMAISS 159
>UniRef50_A5C9S0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 333
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 109 ELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHILKMMKCGS 234
+ +C+ CK T + M H NGK+H+ K K++ +M S
Sbjct: 186 KFWCQTCKIGTTSEDLMKKHQNGKKHMAKLKKNSGTLMAISS 227
>UniRef50_A2Z1C4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 344
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 25 IRREKKNLKPIXXXXXXXXXXXAKPISPELY-CEICKTSMTCSEQMTMHLNGKRHLTKE 198
+ R + NL+ ++ +S ELY C++C T + HL GK+HL +E
Sbjct: 239 VMRHQLNLRAPSSDGSSFTSATSESLSLELYSCKVCSVKCTGERMLAYHLTGKKHLKQE 297
>UniRef50_Q1HQ09 Cluster: WW domain binding protein 4; n=1; Bombyx
mori|Rep: WW domain binding protein 4 - Bombyx mori
(Silk moth)
Length = 293
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 115 YCEICKTSMTCSEQMT-MHLNGKRHLTKEKQHILKMMK 225
YCE CK ++ T H NGK+H K ++HI K+ K
Sbjct: 12 YCEFCKCWFADNKVSTSFHENGKKHKDKVQEHISKLSK 49
>UniRef50_Q1VUD1 Cluster: ATPase involved in DNA repair; n=3;
Bacteroidetes/Chlorobi group|Rep: ATPase involved in DNA
repair - Psychroflexus torquis ATCC 700755
Length = 1217
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 252 EAPVKQ-EKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAEV 428
EA + Q T+K+ DE +D + N+ ID+D + +A DE IT+ K+ ++
Sbjct: 798 EAKITQLNSTQKNLDELKSDLRVFKNRLIDIDKRTETSVKAYDEHK-KSITESDKKSVQL 856
Query: 429 SK 434
+K
Sbjct: 857 NK 858
>UniRef50_Q584Z4 Cluster: Zinc finger protein, conserved; n=3;
Trypanosoma|Rep: Zinc finger protein, conserved -
Trypanosoma brucei
Length = 366
Score = 34.3 bits (75), Expect = 2.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQHIL 213
P C++CK + C + + H+ HL K++Q IL
Sbjct: 66 PSFACKLCKKTFHCVQTLQAHVRSTAHLIKKEQRIL 101
>UniRef50_Q207T2 Cluster: RNA-binding protein; n=1; Gymnadenia
conopsea|Rep: RNA-binding protein - Gymnadenia conopsea
Length = 313
Score = 33.9 bits (74), Expect = 3.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEK 201
P +C +C T T + + +H +GK+H K K
Sbjct: 92 PPWFCSLCNTPATSKQTLLLHADGKKHRAKAK 123
>UniRef50_O64571 Cluster: Putative RNA-binding protein; n=3;
Arabidopsis thaliana|Rep: Putative RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 33.9 bits (74), Expect = 3.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 91 AKPISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
A+ + + +C +C +MTC + H+ GK+H K +
Sbjct: 78 AELFNSQWFCSLCNATMTCEQDYFAHVYGKKHQEKANE 115
>UniRef50_A7QSC5 Cluster: Chromosome chr3 scaffold_158, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_158, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 255
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 115 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
+C IC S T + HLNG+RH + KQ
Sbjct: 87 WCNICNVSCTRELDLASHLNGRRHFDRIKQ 116
>UniRef50_A7QGK8 Cluster: Chromosome undetermined scaffold_92, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_92, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 206
Score = 33.9 bits (74), Expect = 3.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEK 201
P +C +C T T + + +H++GK+H K +
Sbjct: 56 PPWFCSLCNTKATSKQALLLHVDGKKHQAKAR 87
>UniRef50_Q9GYG3 Cluster: Abnormal growth rate protein 1; n=2;
Caenorhabditis|Rep: Abnormal growth rate protein 1 -
Caenorhabditis elegans
Length = 430
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
L CEIC SMT + H++GK+H KQ
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQ 422
>UniRef50_UPI00004D242D Cluster: UPI00004D242D related cluster; n=1;
Xenopus tropicalis|Rep: UPI00004D242D UniRef100 entry -
Xenopus tropicalis
Length = 112
Score = 33.5 bits (73), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 118 CEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
CE+C + + Q +H NGK HL + KQ
Sbjct: 36 CEVCNIQLNSAAQAQIHYNGKSHLKRLKQ 64
>UniRef50_Q4RUC4 Cluster: Chromosome 1 SCAF14995, whole genome
shotgun sequence; n=4; Euteleostomi|Rep: Chromosome 1
SCAF14995, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1082
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 PISPEL-YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
P P+L YC+ICK S + HL G++H KE
Sbjct: 321 PKQPQLHYCDICKISCAGPQTYKEHLEGQKHKKKE 355
>UniRef50_A5WV30 Cluster: Novel protein; n=9; Euteleostomi|Rep:
Novel protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1010
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 PISPEL-YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
P P+L YC+ICK S + HL G++H KE
Sbjct: 313 PKQPQLHYCDICKISCAGPQTYREHLEGQKHKKKE 347
>UniRef50_A7PFQ1 Cluster: Chromosome chr11 scaffold_14, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_14, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 429
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Frame = +1
Query: 94 KPISPEL-------YCEICKTSMTCSEQMTMHLNGKRHLTK 195
KP+ P+L +CE+C C M+ H NGK+H+ +
Sbjct: 320 KPVDPKLKKKKFKFWCELCHVGAYCEVVMSTHKNGKKHVAR 360
>UniRef50_A7PE31 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 280
Score = 33.1 bits (72), Expect = 6.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMTMHLNGKRHLTKEK 201
P +C +C T T + + +H +GK+H K +
Sbjct: 93 PPWFCSLCNTKATSKQALLLHADGKKHRAKAR 124
>UniRef50_Q30LC9 Cluster: Gp17; n=2; Listeria phage A511|Rep: Gp17 -
Listeria phage P100
Length = 300
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 246 KTEAPVKQEKTEKSNDETAADCIIVANKAIDVDTAIDLLTQAIDEEDVAEITDEGSKTAE 425
K E K+EKTEKS++E + + + N D+ A++ + ++ E+V E E + T E
Sbjct: 110 KKEEDSKEEKTEKSDEEDSEEAVKNTNSDADIAGALNAVAKSY--ENVKESQREQNTTVE 167
>UniRef50_Q5BW97 Cluster: SJCHGC08015 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08015 protein - Schistosoma
japonicum (Blood fluke)
Length = 232
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 100 ISPELYCEICKTSMTCSEQMTMHLNGKRH 186
+S YCE+C+ + + HLNG+RH
Sbjct: 117 LSGSFYCELCEVEFPSHKALGSHLNGRRH 145
>UniRef50_A2YT98 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 496
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 94 KPISPELYCEICKTSMTCSEQMTMHLNGKRHLTK 195
KP + +L C +C + T + M HLNGK H K
Sbjct: 40 KPKAADLTCAVCGITSTGEKAMQDHLNGKSHKKK 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,152,421
Number of Sequences: 1657284
Number of extensions: 6815043
Number of successful extensions: 19614
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19594
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -