Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30788
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 598 GVCNMGCRRAECYGDSHE 651
           G+CN  C   EC  D  +
Sbjct: 541 GICNEDCNNPECLFDGRD 558


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 CEICKTSMTCSEQMTMHL 171
           C +CK + + S  +T HL
Sbjct: 80  CRLCKKAFSDSSTLTKHL 97


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 118 CEICKTSMTCSEQMTMHL 171
           C +CK + + S  +T HL
Sbjct: 336 CRLCKKAFSDSSTLTKHL 353


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 112 LYCEICKTSMTCSEQMTMHLNGKRH 186
           L C  CK S      MT H+   +H
Sbjct: 378 LKCVWCKQSFPSLAAMTTHMKEAKH 402



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
           L C  C  S     +MT H+   +H T
Sbjct: 479 LKCMWCGQSFRSLAEMTSHMQQTQHYT 505


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 167 CIVICSEQVMEVLHISQYS 111
           C V CS++V   LHI++ S
Sbjct: 504 CGVECSDKVSFFLHIARVS 522


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,346
Number of Sequences: 336
Number of extensions: 1801
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)