Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30788
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC092423-1|AAH92423.1| 471|Homo sapiens zinc finger protein 533... 32 1.7
AK131432-1|BAD18578.1| 421|Homo sapiens protein ( Homo sapiens ... 32 1.7
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 32 2.2
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 32 2.2
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 32 2.2
AB041940-1|BAD83594.1| 307|Homo sapiens G-protein coupled recep... 32 2.2
BC007212-1|AAH07212.1| 395|Homo sapiens zinc finger protein 659... 31 3.8
AK026072-1|BAB15350.1| 395|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 31 3.8
BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin typ... 31 5.0
AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG... 31 5.0
AK223098-1|BAD96818.1| 159|Homo sapiens small nuclear ribonucle... 31 5.0
AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens ... 31 5.0
AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein pr... 31 5.0
BC048123-1|AAH48123.1| 172|Homo sapiens ZNF533 protein protein. 30 8.8
BC038422-1|AAH38422.1| 369|Homo sapiens ZNF533 protein protein. 30 8.8
AK096822-1|BAC04870.1| 395|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK057999-1|BAB71629.1| 369|Homo sapiens protein ( Homo sapiens ... 30 8.8
AC068042-1|AAY24322.1| 339|Homo sapiens unknown protein. 30 8.8
>BC092423-1|AAH92423.1| 471|Homo sapiens zinc finger protein 533
protein.
Length = 471
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 115 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
+CE+C + + Q +H NGK H + KQ
Sbjct: 35 FCEVCNIQLNSAAQAQVHSNGKSHRKRVKQ 64
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 285 LYCSLCKVAVNSLSQLEAHNTGSKHKT 311
>AK131432-1|BAD18578.1| 421|Homo sapiens protein ( Homo sapiens
cDNA FLJ16557 fis, clone SYNOV2021953, moderately
similar to Mus musculus zinc finger protein 385
(Zfp385). ).
Length = 421
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 115 YCEICKTSMTCSEQMTMHLNGKRHLTKEKQ 204
+CE+C + + Q +H NGK H + KQ
Sbjct: 50 FCEVCNIQLNSAAQAQVHSNGKSHRKRVKQ 79
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 300 LYCSLCKVAVNSLSQLEAHNTGSKHKT 326
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 PISPEL-YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
P P++ YC++CK S + HL G++H KE
Sbjct: 325 PKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 PISPEL-YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
P P++ YC++CK S + HL G++H KE
Sbjct: 325 PKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 31.9 bits (69), Expect = 2.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 97 PISPEL-YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
P P++ YC++CK S + HL G++H KE
Sbjct: 303 PKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 337
>AB041940-1|BAD83594.1| 307|Homo sapiens G-protein coupled receptor
protein.
Length = 307
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -3
Query: 215 FRMCCFSLVRWRLPLRCIVICSEQVMEVLHISQYSSGDIGLA 90
F FSL+ + LPL +V CS QV+ VL S+ + D+G A
Sbjct: 169 FSTTAFSLLGFYLPLAIVVFCSLQVVTVL--SRRPAADVGQA 208
>BC007212-1|AAH07212.1| 395|Homo sapiens zinc finger protein 659
protein.
Length = 395
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ + Q+ H +G +H T
Sbjct: 204 LYCSLCKVAVNSASQLEAHNSGTKHKT 230
>AK026072-1|BAB15350.1| 395|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22419 fis, clone HRC08593. ).
Length = 395
Score = 31.1 bits (67), Expect = 3.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ + Q+ H +G +H T
Sbjct: 204 LYCSLCKVAVNSASQLEAHNSGTKHKT 230
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 31.1 bits (67), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 115 YCEICKTSMTCSEQMTMHLNGKRHLTKE 198
YC+ICK S + HL G++H KE
Sbjct: 235 YCDICKISCAGPQTYREHLGGQKHRKKE 262
Score = 30.3 bits (65), Expect = 6.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 100 ISPELYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
+ +L+C++C S T ++ H+ G +H K H
Sbjct: 278 VQAQLHCDLCAVSCTGADAYAAHIRGSKHQKVFKLH 313
>BC002896-1|AAH02896.1| 289|Homo sapiens zinc finger, matrin type 3
protein.
Length = 289
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
LYC++C ++ ++Q H GK H K + +
Sbjct: 70 LYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AY037945-1|AAK71491.1| 288|Homo sapiens zinc finger protein WIG1
protein.
Length = 288
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
LYC++C ++ ++Q H GK H K + +
Sbjct: 70 LYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AK223098-1|BAD96818.1| 159|Homo sapiens small nuclear
ribonucleoprotein polypeptide C variant protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.0
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 106 PELYCEICKTSMTCSEQMT--MHLNGKRHLTKEKQHILKMMK 225
P+ YC+ C T +T H +G++H EK + K M+
Sbjct: 2 PKFYCDYCDTYLTHDSPSVRKTHCSGRKHRENEKDYYQKWME 43
>AK022358-1|BAB14020.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12296 fis, clone MAMMA1001820, moderately
similar to Rattus norvegicus mRNA for PAG608 gene. ).
Length = 289
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
LYC++C ++ ++Q H GK H K + +
Sbjct: 70 LYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>AF355465-1|AAK83287.1| 288|Homo sapiens WIG-1/PAG608 protein
protein.
Length = 288
Score = 30.7 bits (66), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLTKEKQH 207
LYC++C ++ ++Q H GK H K + +
Sbjct: 70 LYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNY 101
>BC048123-1|AAH48123.1| 172|Homo sapiens ZNF533 protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 89 LYCSLCKVAVNSLSQLEAHNTGSKHKT 115
>BC038422-1|AAH38422.1| 369|Homo sapiens ZNF533 protein protein.
Length = 369
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 183 LYCSLCKVAVNSLSQLEAHNTGSKHKT 209
>AK096822-1|BAC04870.1| 395|Homo sapiens protein ( Homo sapiens
cDNA FLJ39503 fis, clone PROST2017128, moderately
similar to Hematopoietic zinc finger. ).
Length = 395
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 209 LYCSLCKVAVNSLSQLEAHNTGSKHKT 235
>AK057999-1|BAB71629.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ25270 fis, clone STM05566. ).
Length = 369
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 183 LYCSLCKVAVNSLSQLEAHNTGSKHKT 209
>AC068042-1|AAY24322.1| 339|Homo sapiens unknown protein.
Length = 339
Score = 29.9 bits (64), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 112 LYCEICKTSMTCSEQMTMHLNGKRHLT 192
LYC +CK ++ Q+ H G +H T
Sbjct: 153 LYCSLCKVAVNSLSQLEAHNTGSKHKT 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,959,474
Number of Sequences: 237096
Number of extensions: 1059847
Number of successful extensions: 2817
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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