Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30786
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 128 4e-30
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 128 4e-30
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 128 4e-30
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 31 0.94
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 31 0.94
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 31 0.94
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 31 0.94
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 31 0.94
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 31 0.94
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 31 0.94
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 31 0.94
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 31 0.94
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 2.2
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 5.0
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 5.0
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 5.0
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 27 8.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 128 bits (308), Expect = 4e-30
Identities = 59/80 (73%), Positives = 64/80 (80%)
Frame = +1
Query: 1 GYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRR 180
G V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRR
Sbjct: 289 GSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRR 348
Query: 181 TGKSTEVNPKSIKSGDAAIV 240
TGK E PK +KSGDA IV
Sbjct: 349 TGKKVEDFPKFLKSGDAGIV 368
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3
Query: 255 KPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 356
KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 374 KPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 128 bits (308), Expect = 4e-30
Identities = 59/80 (73%), Positives = 64/80 (80%)
Frame = +1
Query: 1 GYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRR 180
G V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRR
Sbjct: 323 GSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRR 382
Query: 181 TGKSTEVNPKSIKSGDAAIV 240
TGK E PK +KSGDA IV
Sbjct: 383 TGKKVEDFPKFLKSGDAGIV 402
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3
Query: 255 KPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 356
KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 408 KPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 128 bits (308), Expect = 4e-30
Identities = 59/80 (73%), Positives = 64/80 (80%)
Frame = +1
Query: 1 GYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRR 180
G V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRR
Sbjct: 323 GSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRR 382
Query: 181 TGKSTEVNPKSIKSGDAAIV 240
TGK E PK +KSGDA IV
Sbjct: 383 TGKKVEDFPKFLKSGDAGIV 402
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +3
Query: 255 KPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 356
KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 408 KPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 255 KPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 356
+P +E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 497 EPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 52 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 231
F A+V+VL H I++GY+ VL +A + +D++TG+ K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEK 488
Query: 232 AIV 240
I+
Sbjct: 489 CIM 491
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 264 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 299
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 264 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 299
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 209 NPSSLEMQPLSTWYL-QASMCRVLPGIPTPRSFCCP 313
N S +E QPL TW++ C+ + G+ CP
Sbjct: 198 NHSGIERQPLETWHVSDCESCQCIRGVSVCNKMTCP 233
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 445 NFSYNCDTSFTERCFEGQKGYNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 603
NF+ D+S G++ NS++F I+ C + F Y++ + +C
Sbjct: 249 NFAVGLDSSI----LIGKRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -2
Query: 472 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 317
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -2
Query: 418 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 266
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 115 LDCHTAHIACKFAEIKEKVDRRTGKSTE 198
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 115 LDCHTAHIACKFAEIKEKVDRRTGKSTE 198
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 115 LDCHTAHIACKFAEIKEKVDRRTGKSTE 198
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 200 STQNPSSLEMQPLSTWYLQASMCRVLPGIPTP 295
S+ PSS +P+ L +CR +PG P P
Sbjct: 667 SSHVPSSSAAEPVLKLPLVPQLCRTVPGAPEP 698
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 437 NSTIFHTTAILHSPKGVSKDKRATTHSFSIFFTRLV 544
N T+ I SP G+ + +FFTRLV
Sbjct: 866 NQTVHRVRGIKTSPSGLESTSLVLAYGTDLFFTRLV 901
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,973
Number of Sequences: 27780
Number of extensions: 295051
Number of successful extensions: 820
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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