Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30784
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_48362| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=9.4e-08) 54 9e-08
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 48 6e-06
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 4.1
SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87) 29 4.1
SB_7625| Best HMM Match : Pkinase (HMM E-Value=6.8e-10) 29 4.1
SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2) 28 9.4
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 101 bits (243), Expect = 5e-22
Identities = 48/78 (61%), Positives = 61/78 (78%)
Frame = -2
Query: 530 HQLPNRTLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGG 351
HQ+ ++T++EAARLL YNAAR KE G V+E AMAKYFASE+A TSKC+++MGG
Sbjct: 335 HQIAE--VRTKIEAARLLVYNAARRKEAGLPVVREGAMAKYFASEVATLTTSKCMEWMGG 392
Query: 350 VGFTRDFPQEKFYRDAKI 297
VGFT+ +P EK+YRD KI
Sbjct: 393 VGFTKSYPIEKYYRDCKI 410
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/44 (63%), Positives = 29/44 (65%)
Frame = -3
Query: 754 ASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQ 623
AS TC VHFDNVKV SS+LGE G LNEGRIGI AQ
Sbjct: 288 ASSTCPVHFDNVKVPSSSVLGEVGHGYKYAIGMLNEGRIGIGAQ 331
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/78 (38%), Positives = 44/78 (56%)
Frame = -2
Query: 497 LEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEK 318
+E ARL T +A + G A++AK A ++A + + GG GF +++P EK
Sbjct: 407 VETARLATQRSAWEIDQGRRNTYYASIAKCLAGDVANKCATDAVQIFGGNGFNQEYPVEK 466
Query: 317 FYRDAKIGTIYEGTSNMQ 264
RDAKI IYEGT+ +Q
Sbjct: 467 LMRDAKIFQIYEGTAQIQ 484
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = -3
Query: 754 ASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYT 575
AS T + F++V V + ++LG G ++ R +A+ +GL + ++ Y+
Sbjct: 321 ASDTRGITFEDVVVPKENVLGAEGIGFKIAMGAFDKTRPPVASSAVGLARRALEEATKYS 380
Query: 574 LERKQFGKKIYEFQGISYQIA 512
+ERK GK I E Q + + +A
Sbjct: 381 MERKTMGKYICEHQAVQFLLA 401
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = -3
Query: 751 SGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYTL 572
S TC + FDN ++ +++GE L+ R+ +AA +GL Q C+D T+PY
Sbjct: 247 SNTCELVFDNCRIPAENVMGEVNKGVYVLMSGLDIERLILAAGPVGLMQACLDVTVPYLH 306
Query: 571 ERKQFGKKIYEFQ 533
R FG+KI EFQ
Sbjct: 307 ARTAFGQKIGEFQ 319
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 431 KEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTS 273
++ A + +E A + I +GG G+ D+P +F RDAK+ I GTS
Sbjct: 344 RDCAAIILYTAENATQVALDAIQCLGGNGYINDYPTGRFLRDAKLYEIGAGTS 396
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = -3
Query: 754 ASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYT 575
AS T V+FDNV V ++LG LN GR G+A + G +G ++ + +
Sbjct: 183 ASNTAEVYFDNVPVPVENVLGGEGNGFKVAMNILNNGRFGMAGALSGTMKGLIEKAVDFA 242
Query: 574 LERKQFGKKIYEFQGISYQIA 512
R QFG KI F I +IA
Sbjct: 243 ANRTQFGAKIETFGAIQEKIA 263
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = -2
Query: 467 AARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTI 288
+A + +F EAA++K FASE A + +CI +GG GF + E+ RD +I I
Sbjct: 280 SANMDSGATDFQVEAAISKVFASEAAWFVADECIQILGGTGFMKSAGVERVMRDLRIFRI 339
Query: 287 YEGTSNM 267
+EGT+++
Sbjct: 340 FEGTNDI 346
>SB_48362| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=9.4e-08)
Length = 100
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/81 (27%), Positives = 47/81 (58%)
Frame = -2
Query: 509 LQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDF 330
+ +++E + Y+ A+ G VKEA+M+K ++++A ++ + +GG G+ ++
Sbjct: 1 MSSEVEMCKEFNYSVAKRLNDGQYVVKEASMSKLLSTKMADSVIYDALQLLGGYGYMEEY 60
Query: 329 PQEKFYRDAKIGTIYEGTSNM 267
P + RD+++G I GTS +
Sbjct: 61 PLARLLRDSRLGPIGGGTSEI 81
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = -2
Query: 509 LQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDF 330
LQT++E R L Y L + A+M K A + + +T C+ F GG+GFT D
Sbjct: 543 LQTEVELLRSLVYRTTDLHIKKKDSNLLASMLKLKAGRLVREVTDSCLQFWGGMGFTSDV 602
Query: 329 PQEKFYRDAKIGTIYEGTSNMQLQTL 252
+ YRD ++ +I G + L +
Sbjct: 603 EVSRAYRDNRLLSIGGGADEVMLSII 628
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = -3
Query: 751 SGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYTL 572
S T +F+NV+V +S +GE E R+ A ++ + + T Y
Sbjct: 462 SDTAEFYFENVRVPQSYRIGEEGMGFVYQMLQFVEERVFAGASVLVSLERLIKETAEYCK 521
Query: 571 ERKQFGKKIYEFQGISYQIA 512
R FGK I + Q + Y++A
Sbjct: 522 GRTAFGKSILDNQYVHYRLA 541
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 48.4 bits (110), Expect = 6e-06
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = -3
Query: 754 ASGTCMVHFDNVKVHESSILGEXXXXXXXXXGFLNEGRIGIAAQMIGLCQGCMDATIPYT 575
+S T V FDNV+V + + +G E R+ AA MI + C++ATI Y
Sbjct: 88 SSETAQVFFDNVRVPQRNRIGHEGAGFMMQMLQFQEERLFGAANMIKGLEHCINATIDYC 147
Query: 574 LERKQFGKKIYEFQGISYQIA 512
ERK FG + + Q I +++A
Sbjct: 148 KERKTFGNALIDNQVIHFRMA 168
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -2
Query: 509 LQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGF 342
LQT++E R L Y A G + A+MAK A + + +T C+ + GG+G+
Sbjct: 170 LQTEVECLRALVYQATEQYVRGRDVTNLASMAKLKAGRLGREVTDSCLQYWGGMGY 225
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 527 QLPNRTLQTQLEAARLLTYNAARLKEHGHEFVK 429
Q+ + TQLEAARLLT+ AA +K+ G + K
Sbjct: 278 QMKLADIATQLEAARLLTWKAAAIKDAGMNYTK 310
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/98 (24%), Positives = 39/98 (39%)
Frame = -1
Query: 714 CTNRVSLENMAKGTSTRLVS*TKVGLVSRLR*SVCVRAVWTQRFLTH*KGNNSERRFTSF 535
C + + +A + R + +GL R+ ++CVR V + LTH + R F
Sbjct: 1907 CLDEACTKKLANNSCDRGLHCAHLGLKYRIAHTMCVRQVTSFTVLTHKIVKHLHRSFLVI 1966
Query: 534 RASATKSHTADTVGSRPSSNIQRR*TERTRPRVC*RSR 421
+A ++D N+ T RP C R R
Sbjct: 1967 KAMFKSVKSSDQSWCHDYKNLCA--TYGKRPLACPRDR 2002
>SB_26243| Best HMM Match : ACN9 (HMM E-Value=0.87)
Length = 344
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -2
Query: 569 KETIRKEDLRVSGHQLPNRTLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASE 396
++ + KE LRVS + L +++E R+ N++R E+G A K E
Sbjct: 151 EQQLEKEKLRVSQSAKEKQNLLSEIETLRIPMNNSSRNTENGDNLTSHAYKEKLAEKE 208
>SB_7625| Best HMM Match : Pkinase (HMM E-Value=6.8e-10)
Length = 279
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 571 LVCKESLRPYSPDTDRSSEPRYQSDLRSRNQPRTCTLCHILQG 699
L C L Y P+ R + R ++ + S+ PR CT+ + G
Sbjct: 104 LACNMELLGYIPEKLRETSKRAKNFINSKGYPRYCTITTLPDG 146
>SB_13878| Best HMM Match : Vicilin_N (HMM E-Value=0.2)
Length = 611
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -2
Query: 623 DDRSVSGLYGRNDSLHTRKETIRKEDLRVSGHQLPNRTLQTQLEAARLLTYNAARLKEHG 444
+DR ++ + R+ L KE KE+ R G ++ L+ Q+E +L A LK+
Sbjct: 151 EDRRINAVMERDRLLAVHKEH-EKEEARRRGEKVIAEQLRGQMEELKLREEEAVMLKKEQ 209
Query: 443 HEFVKE 426
+ E
Sbjct: 210 EMLIAE 215
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 398 EIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTL 252
E A + + I GG+G +D P FY + I +G + ++T+
Sbjct: 352 ETACRVIDRAIQVHGGMGVCQDSPLAHFYASMRTLRIADGPDEVHMETV 400
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,489,744
Number of Sequences: 59808
Number of extensions: 480107
Number of successful extensions: 1413
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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