Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30784
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   5.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.1  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   9.4  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = -3

Query: 310 GTLKLVQFTRVPATCSYKRCQIIRKGIHTISAFAPNDL*FIFLSFKAYK 164
           G       TR+   C  K    ++    TIS++    + F  +  K YK
Sbjct: 77  GLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKCYK 125


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = -3

Query: 310 GTLKLVQFTRVPATCSYKRCQIIRKGIHTISAFAPNDL*FIFLSFKAYK 164
           G       TR+   C  K    ++    TIS++    + F  +  K YK
Sbjct: 82  GLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKCYK 130


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 19/49 (38%)
 Frame = -3

Query: 310 GTLKLVQFTRVPATCSYKRCQIIRKGIHTISAFAPNDL*FIFLSFKAYK 164
           G       TR+   C  K    ++    TIS++    + F  +  K YK
Sbjct: 82  GLTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLIDTKCYK 130


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 709 RAPSHCRNVPCMCPK 753
           +A  HC  V C+C K
Sbjct: 69  KAGGHCEKVGCICRK 83


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 71   HLDNKSRVICPMYLFKIKHRK 133
            HL+  S   CPM  F ++H+K
Sbjct: 1480 HLNAWSDGGCPMIYFVVEHKK 1500


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 379 VNVCAISEAKYLAI 420
           +N+CAIS  +YLA+
Sbjct: 154 LNLCAISLDRYLAV 167


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 341 TRDFPQEKFYRD-AKIGTIYEGTSNMQLQTLPNY*KGNTHNKR 216
           +++  ++K  R+ +K   I    SN  +  + NY   N +NK+
Sbjct: 301 SKERSRDKTERERSKERKIISSLSNNYISNISNYNNNNNYNKK 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,317
Number of Sequences: 438
Number of extensions: 4602
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)