Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30783
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.33 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   0.33 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 62  NKNVKFK*IQLICYKLVYILFSIKLCFLHSH 154
           N+ ++ K    I  + V+I FS K+C+LH H
Sbjct: 203 NQYLRLKPEGRISNRRVFISFS-KICYLHQH 232


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 62  NKNVKFK*IQLICYKLVYILFSIKLCFLHSH 154
           N+ ++ K    I  + V+I FS K+C+LH H
Sbjct: 221 NQYLRLKPEGRISNRRVFISFS-KICYLHQH 250


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 174 IKKNLCFHDCFKFITK 221
           ++ ++C + CF FITK
Sbjct: 521 VETSICKNFCFGFITK 536


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,491
Number of Sequences: 336
Number of extensions: 1021
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)