Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30783
(319 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125484-1|BAC86178.1| 148|Homo sapiens protein ( Homo sapiens ... 28 6.9
BC112114-1|AAI12115.1| 321|Homo sapiens gap junction protein, a... 27 9.1
BC112110-1|AAI12111.1| 321|Homo sapiens gap junction protein, a... 27 9.1
BC069339-1|AAH69339.1| 321|Homo sapiens gap junction protein, a... 27 9.1
BC007441-1|AAH07441.1| 410|Homo sapiens S-phase kinase-associat... 27 9.1
BC001441-1|AAH01441.1| 410|Homo sapiens S-phase kinase-associat... 27 9.1
AY029177-1|AAK31593.1| 424|Homo sapiens F-box protein SKP2 prot... 27 9.1
AF153047-1|AAD54234.1| 321|Homo sapiens gap junction protein co... 27 9.1
AB050981-1|BAB87202.1| 442|Homo sapiens SKP2-like protein type ... 27 9.1
AB050980-1|BAB87201.1| 410|Homo sapiens SKP2-like protein type ... 27 9.1
AB050979-1|BAB87200.1| 424|Homo sapiens SKP2-like protein type ... 27 9.1
>AK125484-1|BAC86178.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ43495 fis, clone PEBLM2000338. ).
Length = 148
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 111 FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDC 203
+I+ V CV YIH+ C ++ ++C + C
Sbjct: 27 YIYLYVYVCVIYIHVCVCVCVLYIHVCVYVC 57
>BC112114-1|AAI12115.1| 321|Homo sapiens gap junction protein,
alpha 9, 36kDa protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 8 RCKSQMKGSQCKRKSIYENKN 70
+ K ++G+Q KRKSIYE +N
Sbjct: 279 KIKLAVRGAQAKRKSIYEIRN 299
>BC112110-1|AAI12111.1| 321|Homo sapiens gap junction protein,
alpha 9, 36kDa protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 8 RCKSQMKGSQCKRKSIYENKN 70
+ K ++G+Q KRKSIYE +N
Sbjct: 279 KIKLAVRGAQAKRKSIYEIRN 299
>BC069339-1|AAH69339.1| 321|Homo sapiens gap junction protein,
alpha 9, 36kDa protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 8 RCKSQMKGSQCKRKSIYENKN 70
+ K ++G+Q KRKSIYE +N
Sbjct: 279 KIKLAVRGAQAKRKSIYEIRN 299
>BC007441-1|AAH07441.1| 410|Homo sapiens S-phase kinase-associated
protein 2 (p45) protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
>BC001441-1|AAH01441.1| 410|Homo sapiens S-phase kinase-associated
protein 2 (p45) protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
>AY029177-1|AAK31593.1| 424|Homo sapiens F-box protein SKP2
protein.
Length = 424
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
>AF153047-1|AAD54234.1| 321|Homo sapiens gap junction protein
connexin-36 protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 8 RCKSQMKGSQCKRKSIYENKN 70
+ K ++G+Q KRKSIYE +N
Sbjct: 279 KIKLAVRGAQAKRKSIYEIRN 299
>AB050981-1|BAB87202.1| 442|Homo sapiens SKP2-like protein type
gamma protein.
Length = 442
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
>AB050980-1|BAB87201.1| 410|Homo sapiens SKP2-like protein type
beta protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
>AB050979-1|BAB87200.1| 424|Homo sapiens SKP2-like protein type
alpha protein.
Length = 424
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 63 IKMLNLSKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCFHDCFK 209
I LNLS Y + LV C +H+D ++ KN CF + F+
Sbjct: 285 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,539,877
Number of Sequences: 237096
Number of extensions: 454211
Number of successful extensions: 467
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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