Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30783
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42844-8|AAB53820.1|  400|Caenorhabditis elegans Hypothetical pr...    33   0.045
U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical pr...    26   6.8  
U88172-6|AAB42261.1|  310|Caenorhabditis elegans Hypothetical pr...    26   6.8  
AF067217-1|AAY55828.1|  191|Caenorhabditis elegans Hypothetical ...    26   6.8  
Z70752-4|CAA94756.2|  363|Caenorhabditis elegans Hypothetical pr...    25   8.9  

>U42844-8|AAB53820.1|  400|Caenorhabditis elegans Hypothetical
           protein C08A9.8 protein.
          Length = 400

 Score = 33.1 bits (72), Expect = 0.045
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 29  GSQCKRKSIYENKNVKFK*IQLICYKLVYILFSIKLC---FLHSHGFLFSNHQEESL 190
           G+ CK    Y NK +K K ++L  Y   Y +FS K     FL+ H F F  H+ ESL
Sbjct: 86  GNNCKHFIQYPNKQIKTKLLKLKSYSNKYKMFSRKKIYRKFLNIHCFKF--HKFESL 140


>U64853-5|AAB04978.2|  460|Caenorhabditis elegans Hypothetical
           protein K11G9.5 protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 81  SKYN*FAIN*FIFCLV*NCVFYIHMDFCFLIIKKNLCF 194
           +KY    +     CLV  C  Y+ M+F F+ +K ++ F
Sbjct: 6   NKYRVLVVFIGFLCLVSVCSNYVVMNFTFICMKNDMSF 43


>Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.10 protein.
          Length = 673

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 199 IVLNLLQSNHEHFKFGP 249
           I+LN+   N EHFK GP
Sbjct: 368 ILLNVFLINKEHFKMGP 384


>Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.5 protein.
          Length = 673

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 199 IVLNLLQSNHEHFKFGP 249
           I+LN+   N EHFK GP
Sbjct: 368 ILLNVFLINKEHFKMGP 384


>U88172-6|AAB42261.1|  310|Caenorhabditis elegans Hypothetical
           protein ZK354.9 protein.
          Length = 310

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = +2

Query: 98  CYKLVYILFSIKLCFLHSHGFLFSNHQEESLFSRLF*IY 214
           C + + +LF+ K+ F  +H F+   + E SL ++++  Y
Sbjct: 84  CLETILLLFAYKVIF-PNHFFMLRGNHECSLINKIYGFY 121


>AF067217-1|AAY55828.1|  191|Caenorhabditis elegans Hypothetical
           protein F56A6.5 protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +2

Query: 5   DRCKSQMKGSQC---KRKSIYENKNV 73
           DRC+ Q+   +C   KR++ +E KNV
Sbjct: 31  DRCRLQLLNKRCPHCKRENAFERKNV 56


>Z70752-4|CAA94756.2|  363|Caenorhabditis elegans Hypothetical
           protein F25B3.4 protein.
          Length = 363

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 98  CYKLVYILFSIKLCFLHSHGFLFSNHQEESLFSRLF*IY 214
           C + + +LF+ K+ F  +H F+   + E SL +R +  Y
Sbjct: 149 CLETILLLFAYKVIF-PNHFFMLRGNHECSLINRQYGFY 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,552,583
Number of Sequences: 27780
Number of extensions: 86587
Number of successful extensions: 174
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)