Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30781
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 77 1e-14
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 60 1e-09
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 60 2e-09
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 58 8e-09
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 58 8e-09
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 58 8e-09
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 56 3e-08
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 56 3e-08
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 54 1e-07
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 54 1e-07
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 54 1e-07
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 54 1e-07
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 52 3e-07
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 50 2e-06
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 47 1e-05
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 29 2.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.4
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 28 5.9
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 28 7.9
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 28 7.9
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 28 7.9
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 7.9
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 7.9
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 99 bits (238), Expect = 2e-21
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +3
Query: 480 QKVPLHQHRFLLHNKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQT 659
+K P + +LH++YDS+ S TY +G + AI+YG+GS+ GF+S D V V G+ Q
Sbjct: 123 KKCPFYDIACMLHHRYDSKSSSTYKEDGRKMAIQYGTGSMKGFISKDSVCVAGVCAEDQP 182
Query: 660 FAEAVSEPGLAFVAAKFDGILGM 728
FAEA SEPG+ FVAAKFDGILGM
Sbjct: 183 FAEATSEPGITFVAAKFDGILGM 205
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +1
Query: 343 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIA 507
+V G E L NY+DAQY+G ISIGTP Q+F V+FDTGSSNLW+PSKKC + +IA
Sbjct: 77 NVEGEIDELLRNYMDAQYFGTISIGTPAQNFTVIFDTGSSNLWIPSKKCPFYDIA 131
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Frame = +1
Query: 241 LRNGTYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP------EPLSNYLDAQYYG 402
L + R+ L + R + + G+ E L+ KY V G P E LS+Y +AQYYG
Sbjct: 14 LASAIQRIKLEKRTYTREQY-KFGSIQEHLKAKY-VPGYIPNKDAFNEGLSDYSNAQYYG 71
Query: 403 VISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIA 507
++IGTPPQ+F+V+FDTGSSNLWVP C + +IA
Sbjct: 72 PVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIA 106
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Frame = +3
Query: 513 LHNKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG----LKVRRQTFAEAVSE 680
+HN++D +KS + A G F I+YG+GS+ G + D V G + Q A A SE
Sbjct: 109 MHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSE 168
Query: 681 PGLAFVAAKFDGILGM 728
PG+ FVAAKFDGI GM
Sbjct: 169 PGITFVAAKFDGIFGM 184
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 346 VTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYT 498
V +P+ ++++ D +Y G I+IGTPPQ F VV DTGS+NLWVP C T
Sbjct: 57 VFASAPQNVNDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNCDGT 107
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEP 683
+++DS KS T+ NG + I+Y SGS G + D V GG L V TF A S
Sbjct: 112 SEFDSSKSTTFKKNGQSWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFGIA-SHI 170
Query: 684 GLAFVAAKFDGILGM 728
F +GILG+
Sbjct: 171 SSNFKNDAAEGILGL 185
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +1
Query: 358 SPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
+P+ ++++ D +Y G I+IGTPPQ F VV DTGSSNLWVP C
Sbjct: 61 APQNVNDFGDFEYLGNITIGTPPQPFLVVLDTGSSNLWVPGPSC 104
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGL 641
+Y S KS T+ ANG + I+YGSG+ G+L D V G +
Sbjct: 113 EYQSTKSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAV 152
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +3
Query: 510 LLHNKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGL 689
++ +K+++ KS ++V + +F I+YGSG SG+L TD V +GGLK+++Q F A +
Sbjct: 105 IIKHKFNTTKSTSFVKSNRKFNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDY 163
Query: 690 AFVAAKFDGILGM 728
F DGI G+
Sbjct: 164 DFGTRPIDGIFGL 176
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/82 (31%), Positives = 35/82 (42%)
Frame = +1
Query: 256 YRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSF 435
++VP + R G L + +PL + D G I+IG+PPQS
Sbjct: 16 FQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIGNITIGSPPQSA 75
Query: 436 KVVFDTGSSNLWVPSKKCHYTN 501
V DT S+NLWV C N
Sbjct: 76 FVFMDTTSANLWVMGSACTSVN 97
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +1
Query: 385 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN 501
D G I+IGTPPQS V DT S+N WV KC N
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSAN 489
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFV 698
+K+++ KS ++V F+ +YG +G+L TD V +GGL + +Q A + GL F
Sbjct: 499 HKFNTTKSTSFVEGNRTFSTEYGL--CTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFG 555
Query: 699 AAKFDGI 719
+ GI
Sbjct: 556 LKPYVGI 562
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +3
Query: 510 LLHNKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGL 689
++ +K+++ KS ++V + +F I+YGSG SG+L TD V +GGLK+++Q F A +
Sbjct: 105 IIKHKFNTTKSTSFVKSNRKFNIQYGSGECSGYLGTDTVEIGGLKIQKQEFGVA-NIVDY 163
Query: 690 AFVAAKFDGILGM 728
F DGI G+
Sbjct: 164 DFGTRPIDGIFGL 176
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/82 (31%), Positives = 35/82 (42%)
Frame = +1
Query: 256 YRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSF 435
++VP + R G L + +PL + D G I+IG+PPQS
Sbjct: 16 FQVPTTTSGSFRAKLIREGKYSSFLASRLQQLNTGSQPLLGFSDDPCIGNITIGSPPQSA 75
Query: 436 KVVFDTGSSNLWVPSKKCHYTN 501
V DT S+NLWV C N
Sbjct: 76 FVFMDTTSANLWVMGSACTSVN 97
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +1
Query: 385 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN 501
D G I+IGTPPQS V DT S+N WV KC N
Sbjct: 451 DDSCIGNITIGTPPQSASVFMDTTSANWWVIGSKCTSAN 489
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFV 698
+K+++ KS ++V F+ +YG +G+L TD V +GGL + +Q A + GL F
Sbjct: 499 HKFNTTKSTSFVEGNRTFSTEYGL--CTGYLGTDTVQMGGLTITKQELGIA-TIVGLGFG 555
Query: 699 AAKFDGI 719
+ GI
Sbjct: 556 LKPYVGI 562
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 57.6 bits (133), Expect = 8e-09
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEP 683
NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V F +A S
Sbjct: 147 NKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLA 206
Query: 684 GLAFVAAKFDGILGM 728
F DGILG+
Sbjct: 207 AF-FEGQPLDGILGL 220
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 370 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
+++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 66 VNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 105
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 57.6 bits (133), Expect = 8e-09
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEP 683
NK+D+ KS +Y NG F I+YG+GS GFL D +T GG L V F +A S
Sbjct: 353 NKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQLAVPNTVFGQATSLA 412
Query: 684 GLAFVAAKFDGILGM 728
F DGILG+
Sbjct: 413 AF-FEGQPLDGILGL 426
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 370 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
+++Y D Y G I+IGTP Q FKV+ DTGSSNLW+P C
Sbjct: 272 VNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITC 311
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 528 DSRKSKTYVANGTQF--AIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
D +S Y A + A YGS S SG L D V+ GG+ + + V A
Sbjct: 21 DQLRSDAYAAGVDDYEHAGYYGSDSASGILGFDTVSFGGISESQLIVPDTV-----VATA 75
Query: 702 AKFDGILGM 728
DGI+G+
Sbjct: 76 EDIDGIMGL 84
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDAQYYGVISIGTPP 426
+VP H+ ++ R + G L ++ +P +Y D Y G I++GTPP
Sbjct: 19 QVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDDFYLGNITLGTPP 78
Query: 427 QSFKVVFDTGSSNLWVPSKKC 489
Q VV DTGSSNLWVP C
Sbjct: 79 QPATVVLDTGSSNLWVPGPSC 99
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGL 641
+Y S KS T+ ANG + I+YGSG+ G+L D V G +
Sbjct: 108 EYQSTKSSTFKANGKPWQIQYGSGNAKGYLGEDTVAFGAV 147
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 361 PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
P+ ++++ D +Y G I+IGTP Q F VV DTGSSNLW+P C
Sbjct: 60 PQNVNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC 102
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG-----LKVRRQTFAEAVSEP 683
+K+DS S T+V NG + I+YGSG +G L D V G L V TF A S+
Sbjct: 110 SKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIA-SKI 168
Query: 684 GLAFVAAKFDGILGM 728
F DGILG+
Sbjct: 169 SADFKNDATDGILGL 183
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K++ KS T+V +F+I+YGSG+ SG+L TD + +GGL V+ Q F A + G +
Sbjct: 116 KFNPNKSSTFVKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVA-TNLGSVLGS 174
Query: 702 AKFDGILGM 728
DGI G+
Sbjct: 175 EPMDGIFGL 183
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 364 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH 492
+PL +Y D Y I++GTPPQ VV DT S+NLWV C+
Sbjct: 58 QPLIDYYDDMYLANITVGTPPQPASVVLDTASANLWVIDAACN 100
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K+D+ KS T+V +F+I+YGSGS +G+L D + GGL V+ Q F + + F
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGY 174
Query: 702 AKFDGILGM 728
DGILG+
Sbjct: 175 QPVDGILGL 183
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDAQYYGVISIGTPP 426
+VP H+ ++ R + G L ++ +P +Y D Y G I++GTPP
Sbjct: 19 QVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDDFYLGNITLGTPP 78
Query: 427 QSFKVVFDTGSSNLWVPSKKC 489
Q VV DTGSSNLWV C
Sbjct: 79 QPATVVLDTGSSNLWVIDAAC 99
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K+D+ KS T+V +F+I+YGSGS +G+L D + GGL V+ Q F + + F
Sbjct: 115 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGY 173
Query: 702 AKFDGILGM 728
DGILG+
Sbjct: 174 QPVDGILGL 182
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDAQYYGVISIGTPP 426
+VP H+ ++ R + G L ++ +P +Y D Y G I++GTPP
Sbjct: 18 QVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDDFYLGNITLGTPP 77
Query: 427 QSFKVVFDTGSSNLWVPSKKC 489
Q VV DTGSSNLWV C
Sbjct: 78 QPATVVLDTGSSNLWVIDAAC 98
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K+D+ KS T+V +F+I+YGSGS +G+L D + GGL V+ Q F + + F
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGY 174
Query: 702 AKFDGILGM 728
DGILG+
Sbjct: 175 QPVDGILGL 183
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDAQYYGVISIGTPP 426
+VP H+ ++ R + G L ++ +P +Y D Y G I++GTPP
Sbjct: 19 QVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDDFYLGNITLGTPP 78
Query: 427 QSFKVVFDTGSSNLWVPSKKC 489
Q VV DTGSSNLWV C
Sbjct: 79 QPATVVLDTGSSNLWVIDAAC 99
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K+D+ KS T+V +F+I+YGSGS +G+L D + GGL V+ Q F + + F
Sbjct: 116 KFDTTKSTTFVKETRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGY 174
Query: 702 AKFDGILGM 728
DGILG+
Sbjct: 175 QPVDGILGL 183
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +1
Query: 259 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP----EPLSNYLDAQYYGVISIGTPP 426
+VP H+ ++ R + G L ++ +P +Y D Y G I++GTPP
Sbjct: 19 QVPTHKTESLRAKLIKEGKYTAFLASQHAARAQQLNTGFQPFVDYFDDFYLGNITLGTPP 78
Query: 427 QSFKVVFDTGSSNLWVPSKKC 489
Q VV DTGSSNLWV C
Sbjct: 79 QPATVVLDTGSSNLWVIDAAC 99
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 364 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
+P+S+Y D Y G ++GTPPQ +V DTGS+N+WV C
Sbjct: 55 QPISDYSDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASC 96
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTV-GGLKVRRQTFAEAVSEPGLAFV 698
K+D+ KS ++ +F+I+YG G SG+L TD V + GGL +R+Q A ++ + F
Sbjct: 113 KFDTSKSSSFSRENRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELGIA-NKLDVDFA 171
Query: 699 AAKFDGILGM 728
DGI G+
Sbjct: 172 VQPMDGIFGL 181
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 YRVPLHRMKTARTHFHEVGTEL-ELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQS 432
YR + + A+ E E ELL K S P+ +Y D Y IS+G+P Q+
Sbjct: 25 YRPNMRQRMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQN 84
Query: 433 FKVVFDTGSSNLWVPSKKCHYTNIAFC 513
F + D+GSSNLWVP C A C
Sbjct: 85 FVLFIDSGSSNLWVPDITCAGGKDATC 111
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 519 NKYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKV--RRQTFAEAVSEPGLA 692
++++S S +YV NG +F + Y +G + GF D V Q F +A + G A
Sbjct: 152 HRFNSSLSSSYVTNGQKFDMTYNTGEVKGFFGVDTFCFTNTSVCATGQVFGQATT-IGEA 210
Query: 693 FVAAKFDGILGM 728
F DGI+G+
Sbjct: 211 FAKQPEDGIIGL 222
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 367 PLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
PL++Y+D Y I++GTPPQS VV TGS+N WV C
Sbjct: 56 PLADYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGC 96
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGGLKVRRQTFAEAVSEPGLAFVA 701
K+ S KS ++V +F I Y +G+ SG+L TD + +GGL V+ Q FA ++
Sbjct: 113 KFYSNKSSSFVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFA-VTTQISDQMGH 171
Query: 702 AKFDGILGM 728
DG+LG+
Sbjct: 172 FPLDGVLGL 180
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Frame = +1
Query: 337 KYDVTGPSPEPLSNYLDAQYYGVISIGTP-----PQSFKVVFDTGSSNLWVPSKKC 489
K+ + + ++++ D Y+G I++GTP Q+F VV DTGSSN+WVP C
Sbjct: 47 KHTIHKGQHQHVADFRDFAYFGNITLGTPIESTAEQTFLVVLDTGSSNVWVPDNSC 102
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 522 KYDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG--LKVRRQTFAEAVSEPGLAF 695
KY S +Y +GT F+I YG+GS SG+ D + L ++ Q F +A + F
Sbjct: 116 KYFGTDSSSYEKDGTPFSISYGTGSASGYFGKDTLCFSDTTLCIKSQIFGQA-NNIAPFF 174
Query: 696 VAAKFDGILGM 728
+ DGILG+
Sbjct: 175 ANQEIDGILGL 185
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 373 SNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 489
++Y+ +Y G I++GTP Q+F VV DTGS+NL +P C
Sbjct: 65 TDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC 103
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 525 YDSRKSKTYVANGTQFAIKYGSGSLSGFLSTDDVTVGG 638
++ + S TY+A + IKY SG G L D V +GG
Sbjct: 113 FNEKASSTYIATNRPWQIKYASGDAYGTLGIDTVKIGG 150
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/80 (36%), Positives = 39/80 (48%)
Frame = +1
Query: 250 GTYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQ 429
G + + L + R G EL RL+ TG E + ++ D Y + IGTP Q
Sbjct: 18 GQFSISLEKSVPLREQLIREGRELA--RLQQLSTGN--ESIYDHFDEYYTVSVRIGTPAQ 73
Query: 430 SFKVVFDTGSSNLWVPSKKC 489
F+V DT SSNLWV +C
Sbjct: 74 HFEVALDTTSSNLWVFGVEC 93
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +1
Query: 376 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN 501
++ D Y + IGTP Q F+V FDT SSNLWV +C N
Sbjct: 147 DHFDEYYTAGVRIGTPAQHFQVAFDTTSSNLWVFGVECRSQN 188
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 577 IANWVPFATYVLDLRLSYLLCSKK 506
+ NW F T L +++SYLLC+K+
Sbjct: 243 LQNWSNFGTTPLIIQISYLLCNKR 266
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 478 KAPRGWRIRCRIPP*TTAAACRY*SLRSTEHQDNLTMVRVKG-QSHRILISTAP 320
KAP R ++PP T AAA R S+ +T +R G +S + ++T P
Sbjct: 717 KAPSTVTTRSKVPPPTAAAAVRIVSVTTTTTPTKTAELRKPGARSPKTTVATVP 770
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 582 YGSGSLSGFLSTDDVTVGGLKVRRQTF 662
Y GSL GFL DDV L +RQ F
Sbjct: 53 YPDGSLEGFLDIDDVQKKKLDEQRQEF 79
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 724 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 593
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 2 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 43
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 724 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 593
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 4 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 45
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 724 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 593
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 1 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 42
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 724 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 593
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 39 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 80
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 724 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERKPERL 593
P IPS+ + ++ P + AS V TL PP+ +S+ +KP L
Sbjct: 113 PAIPSSSSCSE--PSTSQASTVVSAPTLPPPSPLTSLPQKPAPL 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,750,712
Number of Sequences: 27780
Number of extensions: 368609
Number of successful extensions: 1144
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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