Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30780
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 111 7e-24
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 108 6e-23
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 104 1e-21
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 101 7e-21
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 100 2e-20
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 95 8e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 94 2e-18
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 89 5e-17
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 88 1e-16
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 86 4e-16
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 85 9e-16
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 84 2e-15
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 84 2e-15
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 83 3e-15
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 79 8e-14
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 78 1e-13
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 77 2e-13
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 77 2e-13
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 77 3e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 72 7e-12
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 71 1e-11
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 71 2e-11
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 3e-11
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 68 1e-10
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 64 1e-09
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 62 7e-09
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 61 1e-08
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 58 9e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 58 9e-08
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 58 1e-07
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 51 2e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 38 0.17
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 37 0.30
UniRef50_Q3E3P7 Cluster: Caa(3)-type oxidase, subunit IV; n=2; C... 32 6.5
UniRef50_A5IHZ5 Cluster: Sugar kinase; n=3; Legionella pneumophi... 32 6.5
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A3VQM2 Cluster: ATP synthase subunit C; n=1; Parvularcu... 32 8.6
UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=... 32 8.6
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 111 bits (268), Expect = 7e-24
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +2
Query: 2 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 181
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 182 LRHIYIRSPVGVKTVTKIFGGRKRM-ELHLHISAGHQAV 295
RH+Y+R GV ++TKI+GGR+R + H S G ++V
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99
Score = 74.9 bits (176), Expect = 9e-13
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
Q GV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDLDRI
Sbjct: 83 QRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRI 134
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 108 bits (260), Expect = 6e-23
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 194 YIRSPVGVKTVTKIFGGRKR 253
Y+R +GV KI+GGR+R
Sbjct: 68 YLRQGIGVGGFQKIYGGRQR 87
Score = 61.3 bits (142), Expect = 1e-08
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
Q G P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 86 QRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 104 bits (249), Expect = 1e-21
Identities = 45/81 (55%), Positives = 59/81 (72%)
Frame = +2
Query: 2 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 181
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 182 LRHIYIRSPVGVKTVTKIFGG 244
RHIY+R VGV + K++GG
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGG 81
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
G+ PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDLDRI
Sbjct: 86 GMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRI 134
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 101 bits (243), Expect = 7e-21
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +2
Query: 2 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 181
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 182 LRHIYIRSPVGVKTVTKIFGGRKRMELH-LHISAGHQAVL 298
LRH+YIR P G+ + K F +KR + H S H +V+
Sbjct: 61 LRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVI 99
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
GV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 85 GVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 100 bits (239), Expect = 2e-20
Identities = 41/88 (46%), Positives = 63/88 (71%)
Frame = +2
Query: 2 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 181
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 182 LRHIYIRSPVGVKTVTKIFGGRKRMELH 265
R +Y+R GV ++ K++GG R +H
Sbjct: 70 ARKVYLRQYTGVGSLKKVYGGAARKGVH 97
Score = 50.0 bits (114), Expect = 3e-05
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDGGRILTTQGRRDLDRI 402
GV HF ++SG + R LQ LE +K+VEK V GGR +T+ G++DLDRI
Sbjct: 95 GVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKGGRKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 95.1 bits (226), Expect = 8e-19
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 194 YIRSPVGVKTVTKIFGGRKR 253
YIR +G KI+G RKR
Sbjct: 72 YIRGGIGTGEFRKIYGDRKR 91
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 396
G+ P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 93 GMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 93.9 bits (223), Expect = 2e-18
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +2
Query: 26 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 205
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 206 PVGVKTVTKIFGGRKR 253
P GV + +++G KR
Sbjct: 70 PTGVGALRRVYGSNKR 85
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/40 (70%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILT 372
GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRILT
Sbjct: 87 GVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRILT 126
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 89.0 bits (211), Expect = 5e-17
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 20/100 (20%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 133
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 134 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKR 253
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+R
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQR 107
Score = 61.3 bits (142), Expect = 1e-08
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
Q G P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 106 QRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +2
Query: 8 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 187
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 188 HIYIRSPVGVKTVTKIFGGRKR 253
+YIR GV T ++FGG +R
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRR 86
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQGRRDLDRI 402
GV P+HF +G R L+ L+ LK++E GGR +T GRRDLDRI
Sbjct: 88 GVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRI 137
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 86.2 bits (204), Expect = 4e-16
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +2
Query: 8 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 187
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 188 HIYIRSPVGVKTVTKIFGGRKR 253
H+Y GV + K++ +KR
Sbjct: 85 HLYFHPDSGVDRLRKVYSSKKR 106
Score = 35.9 bits (79), Expect = 0.53
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 381
G P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 108 GSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 85.0 bits (201), Expect = 9e-16
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +2
Query: 5 RSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAIL 184
+ T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCAA+L
Sbjct: 27 KGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVL 86
Query: 185 RHIYIRSPVGVKTVTKIFGGRK 250
R IY+R VG ++K FG +K
Sbjct: 87 RAIYLRPGVGYGGLSKRFGNKK 108
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 194 YIRSPVGVKTVTKIFGGRKR 253
Y+R VGV ++K +G ++R
Sbjct: 78 YVRPNVGVGALSKFYGRKQR 97
Score = 32.3 bits (70), Expect = 6.5
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRDLDRI 402
Q G +H +S I R L L++L LVE G R L+ QG+R+LD I
Sbjct: 96 QRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRELDSI 148
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 84.2 bits (199), Expect = 2e-15
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +2
Query: 17 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 196
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 197 IRSPVGVKTVTKIFG 241
+ + +GV + + +G
Sbjct: 67 LNNGIGVMALRRAYG 81
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 265 PSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
PSH SG + R LQ LE + +V K+Q GR LT +GR+D+D+I
Sbjct: 90 PSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDMDKI 134
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 83.4 bits (197), Expect = 3e-15
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 194 YIRSPVGVKTVTKIFGGRK 250
YI PVGV ++ +GG+K
Sbjct: 63 YIDGPVGVNSLRTHYGGKK 81
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDR 399
G P F R SG+I R+ALQ LE L+++ ++ GR++T +GR LD+
Sbjct: 84 GSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFLDK 130
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 78.6 bits (185), Expect = 8e-14
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 194 YIRSPVGVKTVTKIFG 241
Y+R GV +T +FG
Sbjct: 117 YVRGHWGVGNLTHMFG 132
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 194 YIRSPVGVKTVTKIFGGRK 250
YI PVG++ + +GGRK
Sbjct: 63 YIDGPVGIERLRTYYGGRK 81
Score = 52.0 bits (119), Expect = 7e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
G P F ++ GSI RKALQ LEA +EKV GR++T +GR LD+I
Sbjct: 84 GHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKI 132
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 194 YIRSPVGVKTVTKIFGGRK-RMELHLHISAGHQAVL 298
Y++ G+ T+ IFG K R L A H +L
Sbjct: 69 YLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKIL 104
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 77.0 bits (181), Expect = 2e-13
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 194 YIRSPVGVKTVTKIFGGRK 250
Y+ P+GV+ + +GG K
Sbjct: 63 YVDGPLGVERMRSFYGGSK 81
Score = 34.3 bits (75), Expect = 1.6
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 402
G P+ F + SGS+ RKALQ LEA L+ V D GR ++ G LD +
Sbjct: 84 GSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAFLDSV 131
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 76.6 bits (180), Expect = 3e-13
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +2
Query: 5 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 175
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR A
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 176 AILRHIYIRSPVGVKTVTKIFGGRK 250
A+ RHIY+R VGV + K+ G K
Sbjct: 133 AVARHIYMRKTVGVGRLRKVHGSTK 157
Score = 48.4 bits (110), Expect = 9e-05
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRDLDRI 402
G P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RDLDRI
Sbjct: 160 GSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRDLDRI 209
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 72.1 bits (169), Expect = 7e-12
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +2
Query: 26 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 205
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 206 PVGVKTVTKIFGGRK 250
PVGV + +GGR+
Sbjct: 67 PVGVSRLRTYYGGRQ 81
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 71.3 bits (167), Expect = 1e-11
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 8 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 187
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 188 HIYIRSPVGVKTVTKIFGGRKR 253
H+Y G+ + +++ RKR
Sbjct: 85 HLYFHPDEGIGRLRRVYASRKR 106
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 381
G P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 108 GCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/80 (45%), Positives = 47/80 (58%)
Frame = +2
Query: 14 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 193
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 194 YIRSPVGVKTVTKIFGGRKR 253
YI PVG++ + +GGRKR
Sbjct: 61 YIDGPVGIERLRTFYGGRKR 80
Score = 41.9 bits (94), Expect = 0.008
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 256 GVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
G P F + SG+I R AL LE L V+K ++G R++T GR LD++
Sbjct: 82 GSKPPKFRKGSGAIVRNALHQLEQLGFVKKTREG-RVVTPMGRSFLDKV 129
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 32 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 190
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +1
Query: 259 VTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 210 VRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 11 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 190
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 191 IYIRSPVGVKTVTKIFGGR-KRMELHLHISAGHQAV 295
+YI +G+ ++ +GG+ R H ++G +++
Sbjct: 62 LYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSI 97
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 64.5 bits (150), Expect = 1e-09
Identities = 26/79 (32%), Positives = 49/79 (62%)
Frame = +2
Query: 17 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 196
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 197 IRSPVGVKTVTKIFGGRKR 253
I +GV + + F ++R
Sbjct: 110 IHPDIGVGFLRRQFSYKQR 128
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 62.1 bits (144), Expect = 7e-09
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 187
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 188 HIY-IRSPVGVKTVTKIFGGRK 250
+Y P+G++T I+GGR+
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQ 83
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 396
Q G P HF ++ GS+ RK LQ LE LV KV GR ++ GR LD
Sbjct: 83 QNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLD 132
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +2
Query: 20 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 199
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 200 RSPVGVKTVTKIFGGRKR 253
+ + +G +
Sbjct: 74 HHDASLSGLAFHYGANMK 91
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 58.4 bits (135), Expect = 9e-08
Identities = 21/79 (26%), Positives = 48/79 (60%)
Frame = +2
Query: 17 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 196
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 197 IRSPVGVKTVTKIFGGRKR 253
I +G + + +I+ G+K+
Sbjct: 65 IYKKLGTRQLVRIYNGKKK 83
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 58.4 bits (135), Expect = 9e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 17 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 196
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 197 IRSPVGVKTVTKIFGGRK 250
+ P+G+ + K +GG K
Sbjct: 63 LHGPIGINELRKDYGGGK 80
Score = 42.7 bits (96), Expect = 0.005
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +1
Query: 190 YLHSLTCWSQDCHQDLWWAQTYGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 369
YLH + +D + G +H + G+I R A+ LE L +EKV+ GRI+
Sbjct: 62 YLHG-PIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIV 120
Query: 370 TTQGRRDLDRI 402
+ QG + LDR+
Sbjct: 121 SKQGMQKLDRL 131
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +2
Query: 11 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 190
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 191 IYIRSPVGVKTVTKIFGGRKR 253
+ P+G++ + +G +KR
Sbjct: 72 VAQNEPIGIERLATEYGSKKR 92
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = +2
Query: 35 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 214
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 215 VKTVTKIFGGRK 250
+ + +GG K
Sbjct: 63 INGLRSEYGGGK 74
Score = 38.7 bits (86), Expect = 0.075
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 280 RSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 402
++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 85 KAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 247 QTYGVTPSHFCRSSGSIARKALQSLEALK 333
Q GV PSHF R S ++AR+ LQ+LE LK
Sbjct: 79 QRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = -1
Query: 235 DLGDSLDSNR*ANVNMTKDGSTTHIEPIRVIRSQLFEASCLYKIHVLRYLDFARFF*VSS 56
DLG + + V + + GS++ +EP+ ++ S+LF L +H F
Sbjct: 80 DLGHGANPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGC 139
Query: 55 DSFNNLVLFNILYCDGTH 2
S + L+L ++ Y + H
Sbjct: 140 QSSDELLLVHVFYSNSRH 157
>UniRef50_Q3E3P7 Cluster: Caa(3)-type oxidase, subunit IV; n=2;
Chloroflexus|Rep: Caa(3)-type oxidase, subunit IV -
Chloroflexus aurantiacus J-10-fl
Length = 121
Score = 32.3 bits (70), Expect = 6.5
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 102 WIL*RQLASKSWLRMTLIGSMCVVLPSFVIFTFAHL-LESRLSPRSLVGANVWSYTFTFL 278
W+ + WL +T+ S+ + ++ F H+ + SR+S GA VW F+
Sbjct: 44 WVEKNLIHIPGWLAVTIAMSIAIAKTVLIVLYFMHVKVSSRISQVYAAGAFVW-LIILFV 102
Query: 279 QVIRQYCTQGFAIVGG 326
+ Y +G+ GG
Sbjct: 103 ITMGDYVARGWPPQGG 118
>UniRef50_A5IHZ5 Cluster: Sugar kinase; n=3; Legionella
pneumophila|Rep: Sugar kinase - Legionella pneumophila
(strain Corby)
Length = 270
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -1
Query: 391 GLVYLVW*ECDHRPELSQQASMPPTIAKPCVQYCLMTCRNVKV*LHTFAPTKDLGD 224
G+V VW + H+ +S+ PP + K V Y + +C + LHT++P DLGD
Sbjct: 89 GMVPTVW-QVGHQMSMSK----PPQMHKE-VWYEMNSCHQQGIVLHTYSPDIDLGD 138
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 31.9 bits (69), Expect = 8.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 239 GGRKRMELHLHISAGHQAVLHARLCNRWRH 328
G +E H +AG + +HAR+ RWRH
Sbjct: 194 GAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
>UniRef50_A3VQM2 Cluster: ATP synthase subunit C; n=1; Parvularcula
bermudensis HTCC2503|Rep: ATP synthase subunit C -
Parvularcula bermudensis HTCC2503
Length = 282
Score = 31.9 bits (69), Expect = 8.6
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = -3
Query: 308 ALRAILPDDLQK---CEGVTPYVCAHQRSW*QS*LQQVSECKYDEGWQHNAHRTNQGHTE 138
A RA +PD + + CEGVT +C + ++ L S ++D G+ A R G T
Sbjct: 29 AYRAAVPDGIARLTDCEGVTEEICDCRSGGLKAELPTPSIGQFDRGYDVLADRLQAGDTL 88
Query: 137 PAL*S---ELSLQDPCAQVP*LCPFF 69
P E + A+V C FF
Sbjct: 89 PVAERTAIEAVFTNIAAEVERTCQFF 114
>UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=6;
Trypanosomatidae|Rep: DNA primase small subunit,
putative - Leishmania major
Length = 451
Score = 31.9 bits (69), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 155 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRMEL 262
W ++ CAA + H +R G K + +F GR+ + L
Sbjct: 190 WAWMSCAAHVLHTVLRDDFGFKYILPVFSGRRGIHL 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,425,711
Number of Sequences: 1657284
Number of extensions: 8733504
Number of successful extensions: 22773
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 22098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22765
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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