Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30778
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   0.68 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   8.3  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 533 NIPYHGPQFIGAEHYNVARGVQKILQDYKSLQDIIA-ILGMDELSEEDKLTVA 378
           N+  H P FI A   + +RG  K L   ++L+  +  I  +++L   D+ TV+
Sbjct: 74  NLRQHIPNFIAAAFESNSRGGNKKLSKVETLRMAVEYIRSLEDLLALDESTVS 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 778  AWSYPTAVGYQPTLATDMGTMQERITTTKKGSITSVQAI 662
            +W  PT   Y+P   T+    +   +TT + + T  Q I
Sbjct: 1165 SWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLI 1203


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 718 MQERITTTKKGSITSVQAIYVPADDLTDPAP 626
           +Q R +T+    +   Q   +P+D  T P P
Sbjct: 52  LQVRPSTSAAADVDGWQVTPLPSDGTTSPEP 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,505
Number of Sequences: 336
Number of extensions: 4272
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)