Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30778
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 52 4e-07
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 50 2e-06
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 38 0.009
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 36 0.047
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 36 0.047
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 31 1.3
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 29 3.1
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 3.1
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 29 4.1
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 4.1
03_06_0672 + 35443883-35444051,35444151-35444482 29 4.1
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 28 7.2
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 7.2
01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305 28 7.2
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 28 9.5
10_08_0444 + 17971724-17971797,17972119-17972176,17972613-179727... 28 9.5
07_03_0504 - 18842442-18844668,18845418-18845428 28 9.5
02_01_0150 + 1063732-1064214,1064290-1064355,1064721-1064803,106... 28 9.5
01_06_1147 + 34892415-34893702,34894051-34894676 28 9.5
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = -1
Query: 766 PTAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 593
P GY + TD+ T+ ER +KGSIT + + +P DD+T P P T +
Sbjct: 305 PGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQI 364
Query: 592 VLSRAIAELGIYPAVDPLDSTSRIMDPNLLELSTTMLH 479
+ R + IYP ++ L S SR+M + E T H
Sbjct: 365 YIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDH 402
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -1
Query: 766 PTAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 593
P GY + TD+ T+ ER + GSIT + + +P DD+T P P T +
Sbjct: 335 PGRRGYPGYMYTDLATIYERAGRIEGRSGSITQIPILTMPNDDITHPTPDLTGYITEGQI 394
Query: 592 VLSRAIAELGIYPAVDPLDSTSRIMDPNLLELSTTMLH 479
+ R + IYP ++ L S SR+M + E T H
Sbjct: 395 YIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDH 432
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 473 LHVQHCSAQLQ*IGVHDTGC*VKRIHSWVDTQFSNGSRKYSGSIQVSKSGG---WSRISQ 643
L HC L +G HD+G K I W +NGS ++ ++ + G +SR
Sbjct: 103 LKTTHCHPILVRLGWHDSGTYDKNIKEWPQRGGANGSLRFDVELKHGANAGNITFSRFRF 162
Query: 644 VISWYINSL 670
+++W +N+L
Sbjct: 163 LVAWLVNAL 171
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 35.5 bits (78), Expect = 0.047
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -1
Query: 766 PTAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVPADDLTDPAPATTFAH 608
P GY LA + + ER K GS+T V A+ P D +DP + T +
Sbjct: 389 PADSGYPAYLAARLASFYERAGKVKCLGSPDRTGSVTIVGAVSPPGGDFSDPVTSATLSI 448
Query: 607 LDATTVLSRAIAELGIYPAVDPLDSTSR 524
+ L + +A+ +P+V+ L S S+
Sbjct: 449 VQVFWGLDKKLAQRKHFPSVNWLISYSK 476
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 345
+++LQ L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 500 REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 542
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 35.5 bits (78), Expect = 0.047
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -1
Query: 766 PTAVGYQPTLATDMGTMQERI-------TTTKKGSITSVQAIYVPADDLTDPAPATTFAH 608
P GY LA + + ER + + GS+T V A+ P D +DP + T +
Sbjct: 375 PADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSDPVTSATLSI 434
Query: 607 LDATTVLSRAIAELGIYPAVDPLDSTSRIMD-PNLLE 500
+ L + +A+ +P+V+ L S S+ P LE
Sbjct: 435 VQVFWGLDKKLAQRKHFPSVNWLISYSKYSKIPTALE 471
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 470 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 345
+++LQ L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 489 REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 531
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -1
Query: 742 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 584
TL T + T IT T G V+ + +PA L P P+ T LDA VLS
Sbjct: 50 TLTTQVCTSWVGITCTPDGR--RVRELRLPAVGLFGPIPSDTLGKLDALQVLS 100
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 563 TQFSNGSRKYSGSIQVSKSGGWSRISQVISWYINSLHRCDGTFLGGGNSFLHSTHVSSQS 742
+++S S +SG + ++S S+IS S I RC T GGN L S+ V S S
Sbjct: 476 SRYSVSSPPFSGMLPTNRSDHLSQISNEDSDDICKEVRCIETNETGGNECLESSAVGSNS 535
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 524 YHGPQFIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAR 369
Y G + G +HY + ++K LQD K+ +I G++ LSEE+ R R
Sbjct: 399 YMGIRPFGTDHY-LRFMLRKKLQDIKNDDKMIQAEGVESLSEEELRQACRER 449
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 GESFDGFLKWY*FTRMSSEHLSYLER------L*EEPLNFTCTCHCQLVFFR*LVHTQNS 428
G +FD + W F + L YLE + P TC V R LVH Q+S
Sbjct: 704 GFTFDCRVPWVTFKEEAMPSLQYLELKLYAGPAGKIPSGITCLPCLTKVILRYLVHYQSS 763
Query: 429 NNVLQGFVVLKNFLNSTCNIVVLSSN 506
+V ++ + N++VLS N
Sbjct: 764 ASVQDTISKMRKESSEHPNMIVLSQN 789
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 310 ACPVNTSATWKGCERNL*ILRARATVNLSSSDNSSI 417
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 485 VARGVQKILQDYKSLQDIIAILGMDELSEEDK 390
VA GVQ++++ KSL I A+ +E EE++
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEER 115
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 745 PTLATD--MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 620
P L TD T + TT S+ SVQ P D +T P P +
Sbjct: 421 PRLFTDGQQPTQSAQQTTNVPSSVGSVQTTPFPVDSITGPTPCS 464
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 310 ACPVNTSATWKGCERNL*ILR 372
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>01_06_0676 + 31101633-31102192,31102450-31102807,31103033-31103305
Length = 396
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 338 QVAEVFTGHAGKLVPLEETIKGFSKILAGTMITYLKLHFTWL 213
+ +EV + AGK++PL + ++ G LH TWL
Sbjct: 354 KASEVLSADAGKIIPLNLQFMVAACLVLGYHFLLSSLHSTWL 395
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 721 TMQERITTTKKGSITSVQAIYVPADDLTDPAPAT 620
T E+ TT S+ SV+ P D +T P P +
Sbjct: 230 TQSEQQTTNVPNSVGSVETTPFPVDSITGPTPCS 263
>10_08_0444 +
17971724-17971797,17972119-17972176,17972613-17972708,
17972974-17973000,17973019-17973075,17973604-17973687,
17974304-17974384,17974928-17975071,17975218-17975309,
17975998-17976079,17976818-17977000,17977360-17977438,
17977555-17977613,17978162-17978290,17979188-17979367,
17980312-17980446,17980528-17980602,17980890-17980947,
17981035-17981282,17981594-17981733,17981961-17982132,
17982797-17982887,17983099-17983221,17984951-17985032,
17985715-17985835,17985886-17985915,17986427-17986549
Length = 940
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 626 WSRISQVISWYINSLHRCDGTFLGGGNSFLH 718
W R V Y+ SL+RCD L S H
Sbjct: 421 WPRFKTVFDMYLQSLYRCDTKLLWVDGSHPH 451
>07_03_0504 - 18842442-18844668,18845418-18845428
Length = 745
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 446 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVP 294
S +++++++ MD+ S +TV K+ FL A H+G +P
Sbjct: 310 SARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDIP 360
>02_01_0150 +
1063732-1064214,1064290-1064355,1064721-1064803,
1065100-1065155,1065247-1066061
Length = 500
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -3
Query: 470 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL 291
+K+L+ ++Q+ ++ ++ E + A + + R LS F+ ++ AG LVP+
Sbjct: 181 KKMLKHRYAMQEAKHLVCDKNVTVEQSIHTALSSQFVR-LSSYFK--KIHMSGAGNLVPM 237
Query: 290 EETIKGFSKILAG 252
E +K SKI AG
Sbjct: 238 EIALKVASKIAAG 250
>01_06_1147 + 34892415-34893702,34894051-34894676
Length = 637
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 673 VQAIYVPADDLTDPAPATTFAHLDATTVLS 584
VQ + +PA L P P+ T LDA VLS
Sbjct: 71 VQTLRLPAVGLFGPLPSDTLGKLDALEVLS 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,170,043
Number of Sequences: 37544
Number of extensions: 433007
Number of successful extensions: 1127
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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